Protein–RNA interactions for Protein: Q9BSH3

NICN1, Nicolin-1, humanhuman

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NICN1Q9BSH3 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC18.21■□□□□ 0.51
NICN1Q9BSH3 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
NICN1Q9BSH3 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC18.21■□□□□ 0.51
NICN1Q9BSH3 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
NICN1Q9BSH3 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
NICN1Q9BSH3 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
NICN1Q9BSH3 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
NICN1Q9BSH3 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
NICN1Q9BSH3 AK3-203ENST00000447596 705 ntTSL 2 BASIC18.21■□□□□ 0.51
NICN1Q9BSH3 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
NICN1Q9BSH3 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
NICN1Q9BSH3 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC18.21■□□□□ 0.51
NICN1Q9BSH3 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC18.21■□□□□ 0.51
NICN1Q9BSH3 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC18.21■□□□□ 0.51
NICN1Q9BSH3 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
NICN1Q9BSH3 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC18.21■□□□□ 0.51
NICN1Q9BSH3 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
NICN1Q9BSH3 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
NICN1Q9BSH3 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC18.2■□□□□ 0.5
NICN1Q9BSH3 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
NICN1Q9BSH3 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
NICN1Q9BSH3 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
NICN1Q9BSH3 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
NICN1Q9BSH3 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
NICN1Q9BSH3 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
NICN1Q9BSH3 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC18.2■□□□□ 0.5
NICN1Q9BSH3 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC18.2■□□□□ 0.5
NICN1Q9BSH3 AC099791.2-201ENST00000605725 427 ntBASIC18.2■□□□□ 0.5
NICN1Q9BSH3 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
NICN1Q9BSH3 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC18.2■□□□□ 0.5
NICN1Q9BSH3 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
NICN1Q9BSH3 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC18.19■□□□□ 0.5
NICN1Q9BSH3 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
NICN1Q9BSH3 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
NICN1Q9BSH3 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
NICN1Q9BSH3 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
NICN1Q9BSH3 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
NICN1Q9BSH3 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC18.19■□□□□ 0.5
NICN1Q9BSH3 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
NICN1Q9BSH3 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC18.19■□□□□ 0.5
NICN1Q9BSH3 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC18.19■□□□□ 0.5
NICN1Q9BSH3 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC18.19■□□□□ 0.5
NICN1Q9BSH3 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
NICN1Q9BSH3 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
NICN1Q9BSH3 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC18.19■□□□□ 0.5
NICN1Q9BSH3 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
NICN1Q9BSH3 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
NICN1Q9BSH3 DYM-203ENST00000442713 2147 ntTSL 2 BASIC18.19■□□□□ 0.5
NICN1Q9BSH3 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
NICN1Q9BSH3 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
NICN1Q9BSH3 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
NICN1Q9BSH3 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
NICN1Q9BSH3 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
NICN1Q9BSH3 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC18.18■□□□□ 0.5
NICN1Q9BSH3 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
NICN1Q9BSH3 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
NICN1Q9BSH3 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC18.18■□□□□ 0.5
NICN1Q9BSH3 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
NICN1Q9BSH3 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC18.18■□□□□ 0.5
NICN1Q9BSH3 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
NICN1Q9BSH3 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
NICN1Q9BSH3 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC18.18■□□□□ 0.5
NICN1Q9BSH3 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC18.18■□□□□ 0.5
NICN1Q9BSH3 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
NICN1Q9BSH3 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
NICN1Q9BSH3 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC18.17■□□□□ 0.5
NICN1Q9BSH3 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC18.17■□□□□ 0.5
NICN1Q9BSH3 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
NICN1Q9BSH3 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC18.17■□□□□ 0.5
NICN1Q9BSH3 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
NICN1Q9BSH3 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
NICN1Q9BSH3 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC18.17■□□□□ 0.5
NICN1Q9BSH3 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC18.17■□□□□ 0.5
NICN1Q9BSH3 RBM38-205ENST00000440234 686 ntTSL 2 BASIC18.17■□□□□ 0.5
NICN1Q9BSH3 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC18.17■□□□□ 0.5
NICN1Q9BSH3 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC18.17■□□□□ 0.5
NICN1Q9BSH3 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
NICN1Q9BSH3 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC18.17■□□□□ 0.5
NICN1Q9BSH3 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
NICN1Q9BSH3 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC18.17■□□□□ 0.5
NICN1Q9BSH3 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
NICN1Q9BSH3 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC18.16■□□□□ 0.5
NICN1Q9BSH3 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
NICN1Q9BSH3 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC18.16■□□□□ 0.5
NICN1Q9BSH3 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
NICN1Q9BSH3 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
NICN1Q9BSH3 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
NICN1Q9BSH3 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC18.16■□□□□ 0.5
NICN1Q9BSH3 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
NICN1Q9BSH3 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
NICN1Q9BSH3 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
NICN1Q9BSH3 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC18.16■□□□□ 0.5
NICN1Q9BSH3 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
NICN1Q9BSH3 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
NICN1Q9BSH3 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
NICN1Q9BSH3 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC18.16■□□□□ 0.5
NICN1Q9BSH3 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC18.15■□□□□ 0.5
NICN1Q9BSH3 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
NICN1Q9BSH3 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
NICN1Q9BSH3 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC18.15■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 48.5 ms