Protein–RNA interactions for Protein: Q99496

RNF2, E3 ubiquitin-protein ligase RING2, humanhuman

Predictions only

Length 336 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF2Q99496 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RNF2Q99496 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC16.84■□□□□ 0.29
RNF2Q99496 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
RNF2Q99496 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC16.84■□□□□ 0.29
RNF2Q99496 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RNF2Q99496 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
RNF2Q99496 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC16.84■□□□□ 0.29
RNF2Q99496 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC16.84■□□□□ 0.29
RNF2Q99496 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RNF2Q99496 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC16.84■□□□□ 0.29
RNF2Q99496 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RNF2Q99496 Z98882.1-201ENST00000622160 2253 ntBASIC16.84■□□□□ 0.29
RNF2Q99496 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RNF2Q99496 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC16.83■□□□□ 0.29
RNF2Q99496 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC16.83■□□□□ 0.29
RNF2Q99496 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
RNF2Q99496 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC16.83■□□□□ 0.28
RNF2Q99496 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
RNF2Q99496 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC16.83■□□□□ 0.28
RNF2Q99496 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
RNF2Q99496 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
RNF2Q99496 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
RNF2Q99496 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC16.83■□□□□ 0.28
RNF2Q99496 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
RNF2Q99496 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
RNF2Q99496 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC16.83■□□□□ 0.28
RNF2Q99496 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC16.83■□□□□ 0.28
RNF2Q99496 AC004687.1-201ENST00000579003 1625 ntBASIC16.83■□□□□ 0.28
RNF2Q99496 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
RNF2Q99496 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC16.83■□□□□ 0.28
RNF2Q99496 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC16.83■□□□□ 0.28
RNF2Q99496 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC16.83■□□□□ 0.28
RNF2Q99496 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
RNF2Q99496 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC16.83■□□□□ 0.28
RNF2Q99496 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC16.83■□□□□ 0.28
RNF2Q99496 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
RNF2Q99496 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC16.83■□□□□ 0.28
RNF2Q99496 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
RNF2Q99496 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RNF2Q99496 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
RNF2Q99496 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC16.82■□□□□ 0.28
RNF2Q99496 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RNF2Q99496 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RNF2Q99496 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC16.82■□□□□ 0.28
RNF2Q99496 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RNF2Q99496 AC006455.2-201ENST00000429931 906 ntBASIC16.82■□□□□ 0.28
RNF2Q99496 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
RNF2Q99496 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
RNF2Q99496 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC16.82■□□□□ 0.28
RNF2Q99496 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC16.82■□□□□ 0.28
RNF2Q99496 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC16.82■□□□□ 0.28
RNF2Q99496 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC16.82■□□□□ 0.28
RNF2Q99496 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
RNF2Q99496 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RNF2Q99496 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RNF2Q99496 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
RNF2Q99496 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RNF2Q99496 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RNF2Q99496 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RNF2Q99496 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RNF2Q99496 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
RNF2Q99496 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
RNF2Q99496 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
RNF2Q99496 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
RNF2Q99496 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC16.81■□□□□ 0.28
RNF2Q99496 AL136116.3-201ENST00000402907 1138 ntBASIC16.81■□□□□ 0.28
RNF2Q99496 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
RNF2Q99496 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
RNF2Q99496 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RNF2Q99496 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC16.81■□□□□ 0.28
RNF2Q99496 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
RNF2Q99496 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RNF2Q99496 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
RNF2Q99496 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
RNF2Q99496 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
RNF2Q99496 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC16.8■□□□□ 0.28
RNF2Q99496 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
RNF2Q99496 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC16.8■□□□□ 0.28
RNF2Q99496 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC16.8■□□□□ 0.28
RNF2Q99496 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RNF2Q99496 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC16.8■□□□□ 0.28
RNF2Q99496 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RNF2Q99496 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
RNF2Q99496 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC16.8■□□□□ 0.28
RNF2Q99496 AC104564.3-201ENST00000582367 638 ntBASIC16.8■□□□□ 0.28
RNF2Q99496 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC16.8■□□□□ 0.28
RNF2Q99496 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC16.8■□□□□ 0.28
RNF2Q99496 AC092171.4-201ENST00000609130 632 ntBASIC16.8■□□□□ 0.28
RNF2Q99496 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
RNF2Q99496 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC16.8■□□□□ 0.28
RNF2Q99496 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC16.8■□□□□ 0.28
RNF2Q99496 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC16.8■□□□□ 0.28
RNF2Q99496 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
RNF2Q99496 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC16.8■□□□□ 0.28
RNF2Q99496 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RNF2Q99496 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC16.8■□□□□ 0.28
RNF2Q99496 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC16.8■□□□□ 0.28
RNF2Q99496 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
RNF2Q99496 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RNF2Q99496 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 36.7 ms