Protein–RNA interactions for Protein: Q96FL8

SLC47A1, Multidrug and toxin extrusion protein 1, humanhuman

Predictions only

Length 570 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC47A1Q96FL8 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC20■□□□□ 0.79
SLC47A1Q96FL8 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SLC47A1Q96FL8 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SLC47A1Q96FL8 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
SLC47A1Q96FL8 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC19.99■□□□□ 0.79
SLC47A1Q96FL8 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
SLC47A1Q96FL8 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
SLC47A1Q96FL8 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SLC47A1Q96FL8 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC19.99■□□□□ 0.79
SLC47A1Q96FL8 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC19.99■□□□□ 0.79
SLC47A1Q96FL8 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SLC47A1Q96FL8 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SLC47A1Q96FL8 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC19.99■□□□□ 0.79
SLC47A1Q96FL8 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
SLC47A1Q96FL8 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SLC47A1Q96FL8 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC19.99■□□□□ 0.79
SLC47A1Q96FL8 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
SLC47A1Q96FL8 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
SLC47A1Q96FL8 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
SLC47A1Q96FL8 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
SLC47A1Q96FL8 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC19.99■□□□□ 0.79
SLC47A1Q96FL8 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
SLC47A1Q96FL8 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SLC47A1Q96FL8 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SLC47A1Q96FL8 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
SLC47A1Q96FL8 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
SLC47A1Q96FL8 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
SLC47A1Q96FL8 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
SLC47A1Q96FL8 GATM-206ENST00000558336 1522 ntTSL 2 BASIC19.98■□□□□ 0.79
SLC47A1Q96FL8 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
SLC47A1Q96FL8 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
SLC47A1Q96FL8 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
SLC47A1Q96FL8 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC19.98■□□□□ 0.79
SLC47A1Q96FL8 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
SLC47A1Q96FL8 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC19.98■□□□□ 0.79
SLC47A1Q96FL8 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC19.98■□□□□ 0.79
SLC47A1Q96FL8 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
SLC47A1Q96FL8 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC19.98■□□□□ 0.79
SLC47A1Q96FL8 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC19.98■□□□□ 0.79
SLC47A1Q96FL8 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC19.98■□□□□ 0.79
SLC47A1Q96FL8 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
SLC47A1Q96FL8 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC19.98■□□□□ 0.79
SLC47A1Q96FL8 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC19.98■□□□□ 0.79
SLC47A1Q96FL8 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
SLC47A1Q96FL8 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
SLC47A1Q96FL8 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
SLC47A1Q96FL8 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC19.97■□□□□ 0.79
SLC47A1Q96FL8 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC19.97■□□□□ 0.79
SLC47A1Q96FL8 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
SLC47A1Q96FL8 OR7E47P-201ENST00000546390 1422 ntBASIC19.97■□□□□ 0.79
SLC47A1Q96FL8 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC19.97■□□□□ 0.79
SLC47A1Q96FL8 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC19.97■□□□□ 0.79
SLC47A1Q96FL8 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC19.97■□□□□ 0.79
SLC47A1Q96FL8 AL031602.1-201ENST00000633169 911 ntBASIC19.97■□□□□ 0.79
SLC47A1Q96FL8 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC19.97■□□□□ 0.79
SLC47A1Q96FL8 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC19.97■□□□□ 0.79
SLC47A1Q96FL8 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
SLC47A1Q96FL8 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
SLC47A1Q96FL8 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
SLC47A1Q96FL8 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
SLC47A1Q96FL8 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC19.97■□□□□ 0.79
SLC47A1Q96FL8 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
SLC47A1Q96FL8 EI24-211ENST00000534546 1544 ntTSL 2 BASIC19.97■□□□□ 0.79
SLC47A1Q96FL8 GTSE1-AS1-202ENST00000623117 1518 ntBASIC19.97■□□□□ 0.79
SLC47A1Q96FL8 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
SLC47A1Q96FL8 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
SLC47A1Q96FL8 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC19.96■□□□□ 0.79
SLC47A1Q96FL8 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
SLC47A1Q96FL8 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
SLC47A1Q96FL8 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC19.96■□□□□ 0.79
SLC47A1Q96FL8 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
SLC47A1Q96FL8 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
SLC47A1Q96FL8 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC19.96■□□□□ 0.79
SLC47A1Q96FL8 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
SLC47A1Q96FL8 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
SLC47A1Q96FL8 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
SLC47A1Q96FL8 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC19.96■□□□□ 0.79
SLC47A1Q96FL8 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
SLC47A1Q96FL8 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
SLC47A1Q96FL8 OXCT2P1-201ENST00000447263 1535 ntBASIC19.96■□□□□ 0.79
SLC47A1Q96FL8 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC19.96■□□□□ 0.79
SLC47A1Q96FL8 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
SLC47A1Q96FL8 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
SLC47A1Q96FL8 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
SLC47A1Q96FL8 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
SLC47A1Q96FL8 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
SLC47A1Q96FL8 LINC01006-201ENST00000333319 2292 ntBASIC19.95■□□□□ 0.78
SLC47A1Q96FL8 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
SLC47A1Q96FL8 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
SLC47A1Q96FL8 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC19.95■□□□□ 0.78
SLC47A1Q96FL8 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
SLC47A1Q96FL8 AL356441.2-201ENST00000443009 864 ntBASIC19.95■□□□□ 0.78
SLC47A1Q96FL8 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC19.95■□□□□ 0.78
SLC47A1Q96FL8 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC19.95■□□□□ 0.78
SLC47A1Q96FL8 AC099791.2-201ENST00000605725 427 ntBASIC19.95■□□□□ 0.78
SLC47A1Q96FL8 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
SLC47A1Q96FL8 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
SLC47A1Q96FL8 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC19.95■□□□□ 0.78
SLC47A1Q96FL8 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
SLC47A1Q96FL8 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms