Protein–RNA interactions for Protein: Q8WXH6

RAB40A, Ras-related protein Rab-40A, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40AQ8WXH6 AF106564.1-201ENST00000607058 2553 ntBASIC18.62■□□□□ 0.57
RAB40AQ8WXH6 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
RAB40AQ8WXH6 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC18.62■□□□□ 0.57
RAB40AQ8WXH6 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
RAB40AQ8WXH6 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
RAB40AQ8WXH6 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
RAB40AQ8WXH6 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
RAB40AQ8WXH6 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RAB40AQ8WXH6 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC18.62■□□□□ 0.57
RAB40AQ8WXH6 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
RAB40AQ8WXH6 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RAB40AQ8WXH6 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
RAB40AQ8WXH6 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
RAB40AQ8WXH6 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RAB40AQ8WXH6 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
RAB40AQ8WXH6 AL157384.1-201ENST00000445995 2473 ntBASIC18.62■□□□□ 0.57
RAB40AQ8WXH6 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
RAB40AQ8WXH6 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RAB40AQ8WXH6 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC18.61■□□□□ 0.57
RAB40AQ8WXH6 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RAB40AQ8WXH6 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC18.61■□□□□ 0.57
RAB40AQ8WXH6 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC18.61■□□□□ 0.57
RAB40AQ8WXH6 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC18.61■□□□□ 0.57
RAB40AQ8WXH6 NKILA-201ENST00000613231 537 ntTSL 4 BASIC18.61■□□□□ 0.57
RAB40AQ8WXH6 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC18.61■□□□□ 0.57
RAB40AQ8WXH6 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RAB40AQ8WXH6 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
RAB40AQ8WXH6 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
RAB40AQ8WXH6 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC18.61■□□□□ 0.57
RAB40AQ8WXH6 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
RAB40AQ8WXH6 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
RAB40AQ8WXH6 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
RAB40AQ8WXH6 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC18.6■□□□□ 0.57
RAB40AQ8WXH6 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
RAB40AQ8WXH6 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC18.6■□□□□ 0.57
RAB40AQ8WXH6 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
RAB40AQ8WXH6 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
RAB40AQ8WXH6 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
RAB40AQ8WXH6 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
RAB40AQ8WXH6 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC18.6■□□□□ 0.57
RAB40AQ8WXH6 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC18.6■□□□□ 0.57
RAB40AQ8WXH6 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
RAB40AQ8WXH6 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC18.59■□□□□ 0.57
RAB40AQ8WXH6 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC18.59■□□□□ 0.57
RAB40AQ8WXH6 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
RAB40AQ8WXH6 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
RAB40AQ8WXH6 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
RAB40AQ8WXH6 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
RAB40AQ8WXH6 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC18.59■□□□□ 0.57
RAB40AQ8WXH6 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
RAB40AQ8WXH6 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
RAB40AQ8WXH6 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC18.59■□□□□ 0.57
RAB40AQ8WXH6 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
RAB40AQ8WXH6 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
RAB40AQ8WXH6 EDA-201ENST00000338901 1233 ntBASIC18.59■□□□□ 0.57
RAB40AQ8WXH6 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC18.59■□□□□ 0.57
RAB40AQ8WXH6 AL138724.1-201ENST00000606771 1088 ntBASIC18.59■□□□□ 0.57
RAB40AQ8WXH6 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
RAB40AQ8WXH6 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
RAB40AQ8WXH6 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
RAB40AQ8WXH6 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
RAB40AQ8WXH6 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
RAB40AQ8WXH6 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
RAB40AQ8WXH6 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC18.58■□□□□ 0.57
RAB40AQ8WXH6 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC18.58■□□□□ 0.57
RAB40AQ8WXH6 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC18.58■□□□□ 0.57
RAB40AQ8WXH6 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
RAB40AQ8WXH6 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
RAB40AQ8WXH6 SERBP1P1-201ENST00000396021 1160 ntBASIC18.58■□□□□ 0.56
RAB40AQ8WXH6 AL355001.2-201ENST00000620617 1191 ntBASIC18.58■□□□□ 0.56
RAB40AQ8WXH6 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
RAB40AQ8WXH6 VGF-203ENST00000611537 1622 ntTSL 5 BASIC18.58■□□□□ 0.56
RAB40AQ8WXH6 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
RAB40AQ8WXH6 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
RAB40AQ8WXH6 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
RAB40AQ8WXH6 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
RAB40AQ8WXH6 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
RAB40AQ8WXH6 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
RAB40AQ8WXH6 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
RAB40AQ8WXH6 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
RAB40AQ8WXH6 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
RAB40AQ8WXH6 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
RAB40AQ8WXH6 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC18.57■□□□□ 0.56
RAB40AQ8WXH6 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
RAB40AQ8WXH6 ASB1-202ENST00000409297 878 ntTSL 5 BASIC18.57■□□□□ 0.56
RAB40AQ8WXH6 PTCHD3P2-201ENST00000424937 1205 ntBASIC18.57■□□□□ 0.56
RAB40AQ8WXH6 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC18.57■□□□□ 0.56
RAB40AQ8WXH6 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC18.57■□□□□ 0.56
RAB40AQ8WXH6 AC142381.2-201ENST00000566120 298 ntBASIC18.57■□□□□ 0.56
RAB40AQ8WXH6 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
RAB40AQ8WXH6 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC18.57■□□□□ 0.56
RAB40AQ8WXH6 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
RAB40AQ8WXH6 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
RAB40AQ8WXH6 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
RAB40AQ8WXH6 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
RAB40AQ8WXH6 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
RAB40AQ8WXH6 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
RAB40AQ8WXH6 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC18.56■□□□□ 0.56
RAB40AQ8WXH6 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
RAB40AQ8WXH6 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms