Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
SNED1Q8TER0 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC26.14■■□□□ 1.78
SNED1Q8TER0 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC26.14■■□□□ 1.78
SNED1Q8TER0 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC26.14■■□□□ 1.78
SNED1Q8TER0 MMAB-206ENST00000540016 945 ntTSL 3 BASIC26.14■■□□□ 1.78
SNED1Q8TER0 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC26.14■■□□□ 1.78
SNED1Q8TER0 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC26.14■■□□□ 1.78
SNED1Q8TER0 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC26.14■■□□□ 1.78
SNED1Q8TER0 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC26.14■■□□□ 1.78
SNED1Q8TER0 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
SNED1Q8TER0 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC26.14■■□□□ 1.77
SNED1Q8TER0 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.77
SNED1Q8TER0 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.77
SNED1Q8TER0 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.77
SNED1Q8TER0 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC26.14■■□□□ 1.77
SNED1Q8TER0 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC26.14■■□□□ 1.77
SNED1Q8TER0 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC26.14■■□□□ 1.77
SNED1Q8TER0 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC26.14■■□□□ 1.77
SNED1Q8TER0 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC26.14■■□□□ 1.77
SNED1Q8TER0 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
SNED1Q8TER0 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
SNED1Q8TER0 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC26.13■■□□□ 1.77
SNED1Q8TER0 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC26.13■■□□□ 1.77
SNED1Q8TER0 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC26.13■■□□□ 1.77
SNED1Q8TER0 AC128676.1-201ENST00000454392 318 ntBASIC26.13■■□□□ 1.77
SNED1Q8TER0 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC26.13■■□□□ 1.77
SNED1Q8TER0 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC26.13■■□□□ 1.77
SNED1Q8TER0 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC26.13■■□□□ 1.77
SNED1Q8TER0 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC26.13■■□□□ 1.77
SNED1Q8TER0 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
SNED1Q8TER0 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
SNED1Q8TER0 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC26.12■■□□□ 1.77
SNED1Q8TER0 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
SNED1Q8TER0 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
SNED1Q8TER0 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
SNED1Q8TER0 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC26.12■■□□□ 1.77
SNED1Q8TER0 ISCU-212ENST00000547005 795 ntTSL 3 BASIC26.12■■□□□ 1.77
SNED1Q8TER0 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC26.12■■□□□ 1.77
SNED1Q8TER0 MMD2-204ENST00000612910 778 ntTSL 5 BASIC26.12■■□□□ 1.77
SNED1Q8TER0 INO80E-214ENST00000620599 515 ntTSL 2 BASIC26.12■■□□□ 1.77
SNED1Q8TER0 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC26.11■■□□□ 1.77
SNED1Q8TER0 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
SNED1Q8TER0 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC26.11■■□□□ 1.77
SNED1Q8TER0 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC26.11■■□□□ 1.77
SNED1Q8TER0 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
SNED1Q8TER0 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC26.11■■□□□ 1.77
SNED1Q8TER0 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC26.11■■□□□ 1.77
SNED1Q8TER0 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC26.11■■□□□ 1.77
SNED1Q8TER0 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC26.11■■□□□ 1.77
SNED1Q8TER0 AC097658.1-201ENST00000475555 843 ntBASIC26.11■■□□□ 1.77
SNED1Q8TER0 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC26.11■■□□□ 1.77
SNED1Q8TER0 CASP6-205ENST00000505486 538 ntTSL 4 BASIC26.11■■□□□ 1.77
SNED1Q8TER0 UNC93B5-201ENST00000530315 699 ntBASIC26.11■■□□□ 1.77
SNED1Q8TER0 AC006058.3-201ENST00000606217 1069 ntBASIC26.11■■□□□ 1.77
SNED1Q8TER0 AC008694.1-202ENST00000636953 945 ntBASIC26.11■■□□□ 1.77
SNED1Q8TER0 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC26.11■■□□□ 1.77
SNED1Q8TER0 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC26.11■■□□□ 1.77
SNED1Q8TER0 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC26.11■■□□□ 1.77
SNED1Q8TER0 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC26.1■■□□□ 1.77
SNED1Q8TER0 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC26.1■■□□□ 1.77
SNED1Q8TER0 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC26.1■■□□□ 1.77
SNED1Q8TER0 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC26.1■■□□□ 1.77
SNED1Q8TER0 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC26.1■■□□□ 1.77
SNED1Q8TER0 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC26.1■■□□□ 1.77
SNED1Q8TER0 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
SNED1Q8TER0 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC26.1■■□□□ 1.77
SNED1Q8TER0 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC26.1■■□□□ 1.77
SNED1Q8TER0 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC26.1■■□□□ 1.77
SNED1Q8TER0 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
SNED1Q8TER0 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC26.09■■□□□ 1.77
SNED1Q8TER0 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC26.09■■□□□ 1.77
SNED1Q8TER0 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC26.09■■□□□ 1.77
SNED1Q8TER0 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC26.09■■□□□ 1.77
SNED1Q8TER0 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC26.09■■□□□ 1.77
SNED1Q8TER0 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC26.09■■□□□ 1.77
SNED1Q8TER0 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC26.09■■□□□ 1.77
SNED1Q8TER0 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC26.09■■□□□ 1.77
SNED1Q8TER0 IRX5-204ENST00000560154 879 ntTSL 5 BASIC26.09■■□□□ 1.77
SNED1Q8TER0 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
SNED1Q8TER0 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC26.09■■□□□ 1.77
SNED1Q8TER0 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC26.09■■□□□ 1.77
SNED1Q8TER0 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
SNED1Q8TER0 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC26.09■■□□□ 1.77
SNED1Q8TER0 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC26.08■■□□□ 1.77
SNED1Q8TER0 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC26.08■■□□□ 1.77
SNED1Q8TER0 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC26.08■■□□□ 1.77
SNED1Q8TER0 RNF146-206ENST00000480444 843 ntTSL 2 BASIC26.08■■□□□ 1.77
SNED1Q8TER0 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC26.08■■□□□ 1.77
SNED1Q8TER0 AC243732.1-201ENST00000612648 864 ntBASIC26.08■■□□□ 1.77
SNED1Q8TER0 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC26.08■■□□□ 1.77
SNED1Q8TER0 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC26.08■■□□□ 1.77
SNED1Q8TER0 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC26.08■■□□□ 1.77
SNED1Q8TER0 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC26.08■■□□□ 1.77
SNED1Q8TER0 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.76
SNED1Q8TER0 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.76
SNED1Q8TER0 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC26.07■■□□□ 1.76
SNED1Q8TER0 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC26.07■■□□□ 1.76
SNED1Q8TER0 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC26.07■■□□□ 1.76
SNED1Q8TER0 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC26.07■■□□□ 1.76
SNED1Q8TER0 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC26.07■■□□□ 1.76
Retrieved 100 of 98,524 protein–RNA pairs in 19.4 ms