Protein–RNA interactions for Protein: Q8TE77

SSH3, Protein phosphatase Slingshot homolog 3, humanhuman

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSH3Q8TE77 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC26.43■■□□□ 1.82
SSH3Q8TE77 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC26.43■■□□□ 1.82
SSH3Q8TE77 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC26.43■■□□□ 1.82
SSH3Q8TE77 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC26.43■■□□□ 1.82
SSH3Q8TE77 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC26.43■■□□□ 1.82
SSH3Q8TE77 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC26.43■■□□□ 1.82
SSH3Q8TE77 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC26.43■■□□□ 1.82
SSH3Q8TE77 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC26.43■■□□□ 1.82
SSH3Q8TE77 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC26.43■■□□□ 1.82
SSH3Q8TE77 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC26.43■■□□□ 1.82
SSH3Q8TE77 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC26.43■■□□□ 1.82
SSH3Q8TE77 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC26.43■■□□□ 1.82
SSH3Q8TE77 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC26.43■■□□□ 1.82
SSH3Q8TE77 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC26.42■■□□□ 1.82
SSH3Q8TE77 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
SSH3Q8TE77 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC26.42■■□□□ 1.82
SSH3Q8TE77 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC26.42■■□□□ 1.82
SSH3Q8TE77 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC26.42■■□□□ 1.82
SSH3Q8TE77 MIR5787-201ENST00000611784 55 ntBASIC26.42■■□□□ 1.82
SSH3Q8TE77 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC26.42■■□□□ 1.82
SSH3Q8TE77 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC26.42■■□□□ 1.82
SSH3Q8TE77 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC26.41■■□□□ 1.82
SSH3Q8TE77 AC004854.2-201ENST00000608450 1441 ntBASIC26.41■■□□□ 1.82
SSH3Q8TE77 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
SSH3Q8TE77 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC26.41■■□□□ 1.82
SSH3Q8TE77 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC26.41■■□□□ 1.82
SSH3Q8TE77 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC26.41■■□□□ 1.82
SSH3Q8TE77 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC26.41■■□□□ 1.82
SSH3Q8TE77 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC26.41■■□□□ 1.82
SSH3Q8TE77 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC26.41■■□□□ 1.82
SSH3Q8TE77 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC26.41■■□□□ 1.82
SSH3Q8TE77 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
SSH3Q8TE77 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
SSH3Q8TE77 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
SSH3Q8TE77 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC26.4■■□□□ 1.82
SSH3Q8TE77 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
SSH3Q8TE77 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC26.4■■□□□ 1.82
SSH3Q8TE77 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC26.4■■□□□ 1.82
SSH3Q8TE77 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
SSH3Q8TE77 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC26.4■■□□□ 1.82
SSH3Q8TE77 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
SSH3Q8TE77 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC26.4■■□□□ 1.82
SSH3Q8TE77 ANKRD20A6P-201ENST00000618763 204 ntBASIC26.4■■□□□ 1.82
SSH3Q8TE77 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC26.4■■□□□ 1.82
SSH3Q8TE77 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
SSH3Q8TE77 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC26.4■■□□□ 1.82
SSH3Q8TE77 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
SSH3Q8TE77 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC26.4■■□□□ 1.82
SSH3Q8TE77 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC26.39■■□□□ 1.82
SSH3Q8TE77 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
SSH3Q8TE77 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
SSH3Q8TE77 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
SSH3Q8TE77 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC26.39■■□□□ 1.82
SSH3Q8TE77 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
SSH3Q8TE77 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
SSH3Q8TE77 COX20-201ENST00000366528 568 ntTSL 2 BASIC26.39■■□□□ 1.82
SSH3Q8TE77 KRT18P5-201ENST00000436075 1291 ntBASIC26.39■■□□□ 1.82
SSH3Q8TE77 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC26.39■■□□□ 1.82
SSH3Q8TE77 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC26.39■■□□□ 1.82
SSH3Q8TE77 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC26.39■■□□□ 1.82
SSH3Q8TE77 AC053503.5-201ENST00000601508 636 ntBASIC26.39■■□□□ 1.82
SSH3Q8TE77 FBXW4P1-201ENST00000426721 2239 ntBASIC26.39■■□□□ 1.81
SSH3Q8TE77 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC26.39■■□□□ 1.81
SSH3Q8TE77 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.81
SSH3Q8TE77 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC26.38■■□□□ 1.81
SSH3Q8TE77 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC26.38■■□□□ 1.81
SSH3Q8TE77 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC26.38■■□□□ 1.81
SSH3Q8TE77 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
SSH3Q8TE77 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC26.38■■□□□ 1.81
SSH3Q8TE77 AL162430.1-201ENST00000480705 870 ntBASIC26.38■■□□□ 1.81
SSH3Q8TE77 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC26.38■■□□□ 1.81
SSH3Q8TE77 NTF6G-201ENST00000591094 616 ntBASIC26.38■■□□□ 1.81
SSH3Q8TE77 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC26.38■■□□□ 1.81
SSH3Q8TE77 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC26.38■■□□□ 1.81
SSH3Q8TE77 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC26.38■■□□□ 1.81
SSH3Q8TE77 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
SSH3Q8TE77 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC26.37■■□□□ 1.81
SSH3Q8TE77 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC26.37■■□□□ 1.81
SSH3Q8TE77 RNF146-206ENST00000480444 843 ntTSL 2 BASIC26.37■■□□□ 1.81
SSH3Q8TE77 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
SSH3Q8TE77 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
SSH3Q8TE77 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
SSH3Q8TE77 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
SSH3Q8TE77 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC26.37■■□□□ 1.81
SSH3Q8TE77 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC26.36■■□□□ 1.81
SSH3Q8TE77 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC26.36■■□□□ 1.81
SSH3Q8TE77 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
SSH3Q8TE77 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC26.36■■□□□ 1.81
SSH3Q8TE77 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC26.36■■□□□ 1.81
SSH3Q8TE77 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC26.36■■□□□ 1.81
SSH3Q8TE77 AC104564.3-201ENST00000582367 638 ntBASIC26.36■■□□□ 1.81
SSH3Q8TE77 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC26.36■■□□□ 1.81
SSH3Q8TE77 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
SSH3Q8TE77 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC26.36■■□□□ 1.81
SSH3Q8TE77 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
SSH3Q8TE77 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
SSH3Q8TE77 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
SSH3Q8TE77 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
SSH3Q8TE77 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
SSH3Q8TE77 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
Retrieved 100 of 98,524 protein–RNA pairs in 21.4 ms