Protein–RNA interactions for Protein: Q8N5R6

CCDC33, Coiled-coil domain-containing protein 33, humanhuman

Predictions only

Length 958 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC33Q8N5R6 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
CCDC33Q8N5R6 AC016769.1-201ENST00000409132 1010 ntBASIC22.3■■□□□ 1.16
CCDC33Q8N5R6 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
CCDC33Q8N5R6 AC137761.2-201ENST00000561729 223 ntBASIC22.3■■□□□ 1.16
CCDC33Q8N5R6 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC22.3■■□□□ 1.16
CCDC33Q8N5R6 AC145350.3-201ENST00000569033 163 ntBASIC22.3■■□□□ 1.16
CCDC33Q8N5R6 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC22.3■■□□□ 1.16
CCDC33Q8N5R6 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC22.3■■□□□ 1.16
CCDC33Q8N5R6 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC22.3■■□□□ 1.16
CCDC33Q8N5R6 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
CCDC33Q8N5R6 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC22.3■■□□□ 1.16
CCDC33Q8N5R6 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC22.3■■□□□ 1.16
CCDC33Q8N5R6 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
CCDC33Q8N5R6 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
CCDC33Q8N5R6 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
CCDC33Q8N5R6 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC22.29■■□□□ 1.16
CCDC33Q8N5R6 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
CCDC33Q8N5R6 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC22.29■■□□□ 1.16
CCDC33Q8N5R6 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
CCDC33Q8N5R6 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC22.29■■□□□ 1.16
CCDC33Q8N5R6 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC22.29■■□□□ 1.16
CCDC33Q8N5R6 COX20-201ENST00000366528 568 ntTSL 2 BASIC22.29■■□□□ 1.16
CCDC33Q8N5R6 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC22.29■■□□□ 1.16
CCDC33Q8N5R6 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
CCDC33Q8N5R6 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC22.29■■□□□ 1.16
CCDC33Q8N5R6 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC22.29■■□□□ 1.16
CCDC33Q8N5R6 AC080038.1-201ENST00000611274 1154 ntBASIC22.29■■□□□ 1.16
CCDC33Q8N5R6 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
CCDC33Q8N5R6 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC22.29■■□□□ 1.16
CCDC33Q8N5R6 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
CCDC33Q8N5R6 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC22.29■■□□□ 1.16
CCDC33Q8N5R6 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC22.29■■□□□ 1.16
CCDC33Q8N5R6 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
CCDC33Q8N5R6 FBXW4P1-201ENST00000426721 2239 ntBASIC22.29■■□□□ 1.16
CCDC33Q8N5R6 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
CCDC33Q8N5R6 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC22.28■■□□□ 1.16
CCDC33Q8N5R6 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC22.28■■□□□ 1.16
CCDC33Q8N5R6 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
CCDC33Q8N5R6 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
CCDC33Q8N5R6 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
CCDC33Q8N5R6 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC22.28■■□□□ 1.16
CCDC33Q8N5R6 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC22.28■■□□□ 1.16
CCDC33Q8N5R6 AC079089.2-201ENST00000531211 1277 ntBASIC22.28■■□□□ 1.16
CCDC33Q8N5R6 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC22.28■■□□□ 1.16
CCDC33Q8N5R6 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC22.28■■□□□ 1.16
CCDC33Q8N5R6 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC22.28■■□□□ 1.16
CCDC33Q8N5R6 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC22.28■■□□□ 1.16
CCDC33Q8N5R6 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC22.28■■□□□ 1.16
CCDC33Q8N5R6 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC22.27■■□□□ 1.16
CCDC33Q8N5R6 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
CCDC33Q8N5R6 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC22.27■■□□□ 1.16
CCDC33Q8N5R6 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC22.27■■□□□ 1.16
CCDC33Q8N5R6 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
CCDC33Q8N5R6 AC010141.3-201ENST00000456659 717 ntBASIC22.27■■□□□ 1.16
CCDC33Q8N5R6 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC22.27■■□□□ 1.16
CCDC33Q8N5R6 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC22.27■■□□□ 1.16
CCDC33Q8N5R6 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC22.27■■□□□ 1.16
CCDC33Q8N5R6 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
CCDC33Q8N5R6 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC22.27■■□□□ 1.16
CCDC33Q8N5R6 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC22.27■■□□□ 1.16
CCDC33Q8N5R6 BX005040.4-201ENST00000637145 1518 ntBASIC22.26■■□□□ 1.15
CCDC33Q8N5R6 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
CCDC33Q8N5R6 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
CCDC33Q8N5R6 AC004854.2-201ENST00000608450 1441 ntBASIC22.26■■□□□ 1.15
CCDC33Q8N5R6 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
CCDC33Q8N5R6 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC22.26■■□□□ 1.15
CCDC33Q8N5R6 ME2-206ENST00000638410 2289 ntTSL 5 BASIC22.26■■□□□ 1.15
CCDC33Q8N5R6 ME2-210ENST00000639255 2262 ntTSL 5 BASIC22.26■■□□□ 1.15
CCDC33Q8N5R6 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
CCDC33Q8N5R6 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
CCDC33Q8N5R6 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC22.26■■□□□ 1.15
CCDC33Q8N5R6 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
CCDC33Q8N5R6 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC22.26■■□□□ 1.15
CCDC33Q8N5R6 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC22.26■■□□□ 1.15
CCDC33Q8N5R6 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC22.26■■□□□ 1.15
CCDC33Q8N5R6 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC22.26■■□□□ 1.15
CCDC33Q8N5R6 AP004607.4-201ENST00000530158 1459 ntBASIC22.26■■□□□ 1.15
CCDC33Q8N5R6 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC22.26■■□□□ 1.15
CCDC33Q8N5R6 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC22.25■■□□□ 1.15
CCDC33Q8N5R6 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC22.25■■□□□ 1.15
CCDC33Q8N5R6 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC22.25■■□□□ 1.15
CCDC33Q8N5R6 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC22.25■■□□□ 1.15
CCDC33Q8N5R6 HLA-L-209ENST00000420110 1011 ntBASIC22.25■■□□□ 1.15
CCDC33Q8N5R6 AC006015.1-201ENST00000429970 570 ntBASIC22.25■■□□□ 1.15
CCDC33Q8N5R6 DBI-210ENST00000542275 757 ntTSL 5 BASIC22.25■■□□□ 1.15
CCDC33Q8N5R6 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC22.25■■□□□ 1.15
CCDC33Q8N5R6 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC22.25■■□□□ 1.15
CCDC33Q8N5R6 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC22.25■■□□□ 1.15
CCDC33Q8N5R6 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
CCDC33Q8N5R6 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
CCDC33Q8N5R6 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC22.25■■□□□ 1.15
CCDC33Q8N5R6 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC22.24■■□□□ 1.15
CCDC33Q8N5R6 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC22.24■■□□□ 1.15
CCDC33Q8N5R6 AC026471.6-201ENST00000622954 1905 ntBASIC22.24■■□□□ 1.15
CCDC33Q8N5R6 STX7-201ENST00000367937 1090 ntTSL 5 BASIC22.24■■□□□ 1.15
CCDC33Q8N5R6 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
CCDC33Q8N5R6 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC22.24■■□□□ 1.15
CCDC33Q8N5R6 DENND3-207ENST00000518347 850 ntTSL 2 BASIC22.24■■□□□ 1.15
CCDC33Q8N5R6 AC068587.7-201ENST00000641602 218 ntBASIC22.24■■□□□ 1.15
CCDC33Q8N5R6 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Retrieved 100 of 98,524 protein–RNA pairs in 44.9 ms