Protein–RNA interactions for Protein: Q86X40

LRRC28, Leucine-rich repeat-containing protein 28, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28Q86X40 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
LRRC28Q86X40 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
LRRC28Q86X40 VGF-203ENST00000611537 1622 ntTSL 5 BASIC18.84■□□□□ 0.61
LRRC28Q86X40 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
LRRC28Q86X40 SYT6-210ENST00000641643 1587 ntBASIC18.84■□□□□ 0.61
LRRC28Q86X40 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
LRRC28Q86X40 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
LRRC28Q86X40 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
LRRC28Q86X40 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC18.83■□□□□ 0.61
LRRC28Q86X40 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC18.83■□□□□ 0.61
LRRC28Q86X40 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.61
LRRC28Q86X40 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
LRRC28Q86X40 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.61
LRRC28Q86X40 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
LRRC28Q86X40 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
LRRC28Q86X40 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
LRRC28Q86X40 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
LRRC28Q86X40 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC18.82■□□□□ 0.6
LRRC28Q86X40 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
LRRC28Q86X40 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC18.82■□□□□ 0.6
LRRC28Q86X40 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
LRRC28Q86X40 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
LRRC28Q86X40 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
LRRC28Q86X40 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
LRRC28Q86X40 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC18.82■□□□□ 0.6
LRRC28Q86X40 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
LRRC28Q86X40 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC18.82■□□□□ 0.6
LRRC28Q86X40 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC18.82■□□□□ 0.6
LRRC28Q86X40 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC18.82■□□□□ 0.6
LRRC28Q86X40 ME2-206ENST00000638410 2289 ntTSL 5 BASIC18.82■□□□□ 0.6
LRRC28Q86X40 ME2-210ENST00000639255 2262 ntTSL 5 BASIC18.82■□□□□ 0.6
LRRC28Q86X40 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
LRRC28Q86X40 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
LRRC28Q86X40 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC18.82■□□□□ 0.6
LRRC28Q86X40 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
LRRC28Q86X40 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC18.81■□□□□ 0.6
LRRC28Q86X40 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
LRRC28Q86X40 AC135279.3-201ENST00000610945 1311 ntBASIC18.81■□□□□ 0.6
LRRC28Q86X40 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC18.81■□□□□ 0.6
LRRC28Q86X40 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
LRRC28Q86X40 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
LRRC28Q86X40 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC18.81■□□□□ 0.6
LRRC28Q86X40 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC18.81■□□□□ 0.6
LRRC28Q86X40 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
LRRC28Q86X40 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
LRRC28Q86X40 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
LRRC28Q86X40 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
LRRC28Q86X40 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC18.81■□□□□ 0.6
LRRC28Q86X40 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC18.81■□□□□ 0.6
LRRC28Q86X40 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
LRRC28Q86X40 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
LRRC28Q86X40 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
LRRC28Q86X40 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC18.81■□□□□ 0.6
LRRC28Q86X40 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
LRRC28Q86X40 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
LRRC28Q86X40 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
LRRC28Q86X40 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
LRRC28Q86X40 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
LRRC28Q86X40 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
LRRC28Q86X40 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
LRRC28Q86X40 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
LRRC28Q86X40 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC18.8■□□□□ 0.6
LRRC28Q86X40 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
LRRC28Q86X40 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC18.8■□□□□ 0.6
LRRC28Q86X40 AC024257.2-201ENST00000549699 147 ntBASIC18.8■□□□□ 0.6
LRRC28Q86X40 AL138724.1-201ENST00000606771 1088 ntBASIC18.8■□□□□ 0.6
LRRC28Q86X40 AC005837.3-201ENST00000612163 286 ntBASIC18.8■□□□□ 0.6
LRRC28Q86X40 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
LRRC28Q86X40 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
LRRC28Q86X40 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC18.8■□□□□ 0.6
LRRC28Q86X40 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
LRRC28Q86X40 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC18.8■□□□□ 0.6
LRRC28Q86X40 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
LRRC28Q86X40 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
LRRC28Q86X40 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
LRRC28Q86X40 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
LRRC28Q86X40 AC019069.1-201ENST00000610008 1333 ntBASIC18.79■□□□□ 0.6
LRRC28Q86X40 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
LRRC28Q86X40 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
LRRC28Q86X40 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
LRRC28Q86X40 AC009086.3-201ENST00000623486 1008 ntBASIC18.79■□□□□ 0.6
LRRC28Q86X40 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
LRRC28Q86X40 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC18.79■□□□□ 0.6
LRRC28Q86X40 LINC01529-204ENST00000636474 1715 ntBASIC18.79■□□□□ 0.6
LRRC28Q86X40 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
LRRC28Q86X40 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC18.79■□□□□ 0.6
LRRC28Q86X40 LINC01006-201ENST00000333319 2292 ntBASIC18.79■□□□□ 0.6
LRRC28Q86X40 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
LRRC28Q86X40 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC18.78■□□□□ 0.6
LRRC28Q86X40 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
LRRC28Q86X40 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
LRRC28Q86X40 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
LRRC28Q86X40 SERBP1P1-201ENST00000396021 1160 ntBASIC18.78■□□□□ 0.6
LRRC28Q86X40 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC18.78■□□□□ 0.6
LRRC28Q86X40 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC18.78■□□□□ 0.6
LRRC28Q86X40 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
LRRC28Q86X40 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC18.78■□□□□ 0.6
LRRC28Q86X40 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
LRRC28Q86X40 FP325331.1-202ENST00000623531 1380 ntBASIC18.78■□□□□ 0.6
LRRC28Q86X40 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms