Protein–RNA interactions for Protein: Q7Z408

CSMD2, CUB and sushi domain-containing protein 2, humanhuman

Predictions only

Length 3,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD2Q7Z408 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CSMD2Q7Z408 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CSMD2Q7Z408 AC138932.3-201ENST00000567634 1902 ntBASIC18.17■□□□□ 0.5
CSMD2Q7Z408 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
CSMD2Q7Z408 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
CSMD2Q7Z408 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC18.17■□□□□ 0.5
CSMD2Q7Z408 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC18.17■□□□□ 0.5
CSMD2Q7Z408 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC18.17■□□□□ 0.5
CSMD2Q7Z408 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC18.17■□□□□ 0.5
CSMD2Q7Z408 RN7SL850P-201ENST00000579959 291 ntBASIC18.17■□□□□ 0.5
CSMD2Q7Z408 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC18.17■□□□□ 0.5
CSMD2Q7Z408 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
CSMD2Q7Z408 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CSMD2Q7Z408 AC233263.1-201ENST00000578059 224 ntBASIC18.16■□□□□ 0.5
CSMD2Q7Z408 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CSMD2Q7Z408 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
CSMD2Q7Z408 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CSMD2Q7Z408 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CSMD2Q7Z408 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC18.16■□□□□ 0.5
CSMD2Q7Z408 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CSMD2Q7Z408 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC18.16■□□□□ 0.5
CSMD2Q7Z408 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
CSMD2Q7Z408 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CSMD2Q7Z408 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC18.16■□□□□ 0.5
CSMD2Q7Z408 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC18.15■□□□□ 0.5
CSMD2Q7Z408 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC18.15■□□□□ 0.5
CSMD2Q7Z408 FAM197Y4-202ENST00000622692 608 ntBASIC18.15■□□□□ 0.5
CSMD2Q7Z408 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC18.15■□□□□ 0.5
CSMD2Q7Z408 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CSMD2Q7Z408 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
CSMD2Q7Z408 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
CSMD2Q7Z408 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
CSMD2Q7Z408 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC18.15■□□□□ 0.5
CSMD2Q7Z408 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CSMD2Q7Z408 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
CSMD2Q7Z408 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC18.15■□□□□ 0.5
CSMD2Q7Z408 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC18.15■□□□□ 0.5
CSMD2Q7Z408 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
CSMD2Q7Z408 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC18.14■□□□□ 0.5
CSMD2Q7Z408 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CSMD2Q7Z408 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CSMD2Q7Z408 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CSMD2Q7Z408 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
CSMD2Q7Z408 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC18.14■□□□□ 0.49
CSMD2Q7Z408 RPPH1-201ENST00000516869 333 ntBASIC18.14■□□□□ 0.49
CSMD2Q7Z408 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC18.14■□□□□ 0.49
CSMD2Q7Z408 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
CSMD2Q7Z408 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CSMD2Q7Z408 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CSMD2Q7Z408 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CSMD2Q7Z408 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CSMD2Q7Z408 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CSMD2Q7Z408 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CSMD2Q7Z408 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC18.14■□□□□ 0.49
CSMD2Q7Z408 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
CSMD2Q7Z408 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
CSMD2Q7Z408 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC18.13■□□□□ 0.49
CSMD2Q7Z408 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CSMD2Q7Z408 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CSMD2Q7Z408 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CSMD2Q7Z408 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC18.13■□□□□ 0.49
CSMD2Q7Z408 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC18.13■□□□□ 0.49
CSMD2Q7Z408 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
CSMD2Q7Z408 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CSMD2Q7Z408 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC18.13■□□□□ 0.49
CSMD2Q7Z408 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC18.13■□□□□ 0.49
CSMD2Q7Z408 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CSMD2Q7Z408 KRT18P35-201ENST00000510488 1269 ntBASIC18.13■□□□□ 0.49
CSMD2Q7Z408 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CSMD2Q7Z408 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC18.13■□□□□ 0.49
CSMD2Q7Z408 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC18.13■□□□□ 0.49
CSMD2Q7Z408 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC18.13■□□□□ 0.49
CSMD2Q7Z408 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC18.13■□□□□ 0.49
CSMD2Q7Z408 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CSMD2Q7Z408 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CSMD2Q7Z408 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC18.12■□□□□ 0.49
CSMD2Q7Z408 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC18.12■□□□□ 0.49
CSMD2Q7Z408 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC18.12■□□□□ 0.49
CSMD2Q7Z408 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CSMD2Q7Z408 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC18.12■□□□□ 0.49
CSMD2Q7Z408 MED17-227ENST00000640521 2047 ntTSL 5 BASIC18.12■□□□□ 0.49
CSMD2Q7Z408 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC18.12■□□□□ 0.49
CSMD2Q7Z408 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CSMD2Q7Z408 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC18.12■□□□□ 0.49
CSMD2Q7Z408 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC18.12■□□□□ 0.49
CSMD2Q7Z408 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
CSMD2Q7Z408 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC18.12■□□□□ 0.49
CSMD2Q7Z408 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CSMD2Q7Z408 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC18.11■□□□□ 0.49
CSMD2Q7Z408 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CSMD2Q7Z408 AC069236.1-201ENST00000604339 616 ntBASIC18.11■□□□□ 0.49
CSMD2Q7Z408 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CSMD2Q7Z408 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC18.11■□□□□ 0.49
CSMD2Q7Z408 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CSMD2Q7Z408 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CSMD2Q7Z408 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CSMD2Q7Z408 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CSMD2Q7Z408 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CSMD2Q7Z408 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CSMD2Q7Z408 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 17.8 ms