Protein–RNA interactions for Protein: Q7Z3D4

LYSMD3, LysM and putative peptidoglycan-binding domain-containing protein 3, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3Q7Z3D4 TERF1P2-201ENST00000583350 1212 ntBASIC21.39■■□□□ 1.01
LYSMD3Q7Z3D4 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC21.39■■□□□ 1.01
LYSMD3Q7Z3D4 AC092666.2-201ENST00000613287 246 ntBASIC21.39■■□□□ 1.01
LYSMD3Q7Z3D4 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC21.39■■□□□ 1.01
LYSMD3Q7Z3D4 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.01
LYSMD3Q7Z3D4 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
LYSMD3Q7Z3D4 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC21.38■■□□□ 1.01
LYSMD3Q7Z3D4 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
LYSMD3Q7Z3D4 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
LYSMD3Q7Z3D4 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC21.38■■□□□ 1.01
LYSMD3Q7Z3D4 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC21.38■■□□□ 1.01
LYSMD3Q7Z3D4 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
LYSMD3Q7Z3D4 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
LYSMD3Q7Z3D4 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
LYSMD3Q7Z3D4 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC21.38■■□□□ 1.01
LYSMD3Q7Z3D4 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC21.38■■□□□ 1.01
LYSMD3Q7Z3D4 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC21.38■■□□□ 1.01
LYSMD3Q7Z3D4 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC21.38■■□□□ 1.01
LYSMD3Q7Z3D4 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
LYSMD3Q7Z3D4 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
LYSMD3Q7Z3D4 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
LYSMD3Q7Z3D4 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
LYSMD3Q7Z3D4 AC010542.4-201ENST00000563151 1910 ntBASIC21.37■■□□□ 1.01
LYSMD3Q7Z3D4 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
LYSMD3Q7Z3D4 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC21.37■■□□□ 1.01
LYSMD3Q7Z3D4 KRT18P14-201ENST00000534205 1250 ntBASIC21.37■■□□□ 1.01
LYSMD3Q7Z3D4 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC21.37■■□□□ 1.01
LYSMD3Q7Z3D4 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
LYSMD3Q7Z3D4 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC21.37■■□□□ 1.01
LYSMD3Q7Z3D4 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
LYSMD3Q7Z3D4 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
LYSMD3Q7Z3D4 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC21.36■■□□□ 1.01
LYSMD3Q7Z3D4 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
LYSMD3Q7Z3D4 ME2-206ENST00000638410 2289 ntTSL 5 BASIC21.36■■□□□ 1.01
LYSMD3Q7Z3D4 ME2-210ENST00000639255 2262 ntTSL 5 BASIC21.36■■□□□ 1.01
LYSMD3Q7Z3D4 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
LYSMD3Q7Z3D4 AC003102.1-202ENST00000563394 1796 ntBASIC21.36■■□□□ 1.01
LYSMD3Q7Z3D4 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
LYSMD3Q7Z3D4 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC21.36■■□□□ 1.01
LYSMD3Q7Z3D4 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
LYSMD3Q7Z3D4 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC21.36■■□□□ 1.01
LYSMD3Q7Z3D4 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC21.36■■□□□ 1.01
LYSMD3Q7Z3D4 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC21.36■■□□□ 1.01
LYSMD3Q7Z3D4 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC21.36■■□□□ 1.01
LYSMD3Q7Z3D4 ANKRD20A6P-201ENST00000618763 204 ntBASIC21.36■■□□□ 1.01
LYSMD3Q7Z3D4 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC21.36■■□□□ 1.01
LYSMD3Q7Z3D4 CPT2-209ENST00000636935 803 ntTSL 5 BASIC21.36■■□□□ 1.01
LYSMD3Q7Z3D4 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
LYSMD3Q7Z3D4 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
LYSMD3Q7Z3D4 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
LYSMD3Q7Z3D4 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC21.35■■□□□ 1.01
LYSMD3Q7Z3D4 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC21.35■■□□□ 1.01
LYSMD3Q7Z3D4 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC21.35■■□□□ 1.01
LYSMD3Q7Z3D4 HACD1-201ENST00000326961 773 ntTSL 2 BASIC21.35■■□□□ 1.01
LYSMD3Q7Z3D4 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
LYSMD3Q7Z3D4 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC21.35■■□□□ 1.01
LYSMD3Q7Z3D4 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC21.35■■□□□ 1.01
LYSMD3Q7Z3D4 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC21.35■■□□□ 1.01
LYSMD3Q7Z3D4 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC21.35■■□□□ 1.01
LYSMD3Q7Z3D4 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
LYSMD3Q7Z3D4 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC21.35■■□□□ 1.01
LYSMD3Q7Z3D4 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
LYSMD3Q7Z3D4 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC21.35■■□□□ 1.01
LYSMD3Q7Z3D4 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC21.35■■□□□ 1.01
LYSMD3Q7Z3D4 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC21.35■■□□□ 1.01
LYSMD3Q7Z3D4 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC21.35■■□□□ 1.01
LYSMD3Q7Z3D4 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC21.34■■□□□ 1.01
LYSMD3Q7Z3D4 AC079140.4-201ENST00000507448 529 ntBASIC21.34■■□□□ 1.01
LYSMD3Q7Z3D4 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
LYSMD3Q7Z3D4 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
LYSMD3Q7Z3D4 DUX4L2-201ENST00000561772 1275 ntBASIC21.34■■□□□ 1.01
LYSMD3Q7Z3D4 AC104564.3-201ENST00000582367 638 ntBASIC21.34■■□□□ 1.01
LYSMD3Q7Z3D4 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC21.34■■□□□ 1.01
LYSMD3Q7Z3D4 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC21.34■■□□□ 1.01
LYSMD3Q7Z3D4 DUX4L6-201ENST00000626483 1275 ntBASIC21.34■■□□□ 1.01
LYSMD3Q7Z3D4 DUX4L1-201ENST00000627662 1275 ntBASIC21.34■■□□□ 1.01
LYSMD3Q7Z3D4 DUX4L8-201ENST00000629013 1275 ntBASIC21.34■■□□□ 1.01
LYSMD3Q7Z3D4 DUX4L3-201ENST00000630187 1275 ntBASIC21.34■■□□□ 1.01
LYSMD3Q7Z3D4 DUX4L7-201ENST00000630678 1275 ntBASIC21.34■■□□□ 1.01
LYSMD3Q7Z3D4 DUX4L5-201ENST00000630834 1275 ntBASIC21.34■■□□□ 1.01
LYSMD3Q7Z3D4 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
LYSMD3Q7Z3D4 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC21.34■■□□□ 1.01
LYSMD3Q7Z3D4 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC21.33■■□□□ 1.01
LYSMD3Q7Z3D4 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
LYSMD3Q7Z3D4 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
LYSMD3Q7Z3D4 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC21.33■■□□□ 1.01
LYSMD3Q7Z3D4 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
LYSMD3Q7Z3D4 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
LYSMD3Q7Z3D4 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
LYSMD3Q7Z3D4 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC21.33■■□□□ 1.01
LYSMD3Q7Z3D4 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
LYSMD3Q7Z3D4 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC21.33■■□□□ 1
LYSMD3Q7Z3D4 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
LYSMD3Q7Z3D4 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC21.32■■□□□ 1
LYSMD3Q7Z3D4 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC21.32■■□□□ 1
LYSMD3Q7Z3D4 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC21.32■■□□□ 1
LYSMD3Q7Z3D4 AC034268.1-201ENST00000441047 882 ntBASIC21.32■■□□□ 1
LYSMD3Q7Z3D4 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC21.32■■□□□ 1
LYSMD3Q7Z3D4 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC21.32■■□□□ 1
LYSMD3Q7Z3D4 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC21.32■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms