Protein–RNA interactions for Protein: Q71DI3

HIST2H3A, Histone H3.2, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST2H3AQ71DI3 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
HIST2H3AQ71DI3 MIR572-201ENST00000384983 95 ntBASIC18.68■□□□□ 0.58
HIST2H3AQ71DI3 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
HIST2H3AQ71DI3 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
HIST2H3AQ71DI3 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
HIST2H3AQ71DI3 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC18.68■□□□□ 0.58
HIST2H3AQ71DI3 AC007375.3-201ENST00000600936 2314 ntBASIC18.68■□□□□ 0.58
HIST2H3AQ71DI3 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
HIST2H3AQ71DI3 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
HIST2H3AQ71DI3 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
HIST2H3AQ71DI3 ASL-203ENST00000380839 1765 ntTSL 5 BASIC18.68■□□□□ 0.58
HIST2H3AQ71DI3 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC18.68■□□□□ 0.58
HIST2H3AQ71DI3 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
HIST2H3AQ71DI3 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
HIST2H3AQ71DI3 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC18.67■□□□□ 0.58
HIST2H3AQ71DI3 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC18.67■□□□□ 0.58
HIST2H3AQ71DI3 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC18.67■□□□□ 0.58
HIST2H3AQ71DI3 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC18.67■□□□□ 0.58
HIST2H3AQ71DI3 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
HIST2H3AQ71DI3 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
HIST2H3AQ71DI3 AC003102.1-202ENST00000563394 1796 ntBASIC18.67■□□□□ 0.58
HIST2H3AQ71DI3 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
HIST2H3AQ71DI3 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
HIST2H3AQ71DI3 AC026310.3-201ENST00000625186 2373 ntBASIC18.67■□□□□ 0.58
HIST2H3AQ71DI3 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
HIST2H3AQ71DI3 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
HIST2H3AQ71DI3 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC18.66■□□□□ 0.58
HIST2H3AQ71DI3 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
HIST2H3AQ71DI3 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
HIST2H3AQ71DI3 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
HIST2H3AQ71DI3 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
HIST2H3AQ71DI3 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC18.66■□□□□ 0.58
HIST2H3AQ71DI3 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC18.66■□□□□ 0.58
HIST2H3AQ71DI3 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
HIST2H3AQ71DI3 AC105233.4-201ENST00000642045 216 ntBASIC18.66■□□□□ 0.58
HIST2H3AQ71DI3 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC18.66■□□□□ 0.58
HIST2H3AQ71DI3 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC18.66■□□□□ 0.58
HIST2H3AQ71DI3 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC18.66■□□□□ 0.58
HIST2H3AQ71DI3 MFF-203ENST00000349901 1716 ntTSL 2 BASIC18.66■□□□□ 0.58
HIST2H3AQ71DI3 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC18.65■□□□□ 0.58
HIST2H3AQ71DI3 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
HIST2H3AQ71DI3 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
HIST2H3AQ71DI3 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
HIST2H3AQ71DI3 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
HIST2H3AQ71DI3 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
HIST2H3AQ71DI3 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
HIST2H3AQ71DI3 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
HIST2H3AQ71DI3 EBPL-204ENST00000378272 766 ntTSL 3 BASIC18.65■□□□□ 0.58
HIST2H3AQ71DI3 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
HIST2H3AQ71DI3 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC18.65■□□□□ 0.58
HIST2H3AQ71DI3 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
HIST2H3AQ71DI3 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
HIST2H3AQ71DI3 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
HIST2H3AQ71DI3 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
HIST2H3AQ71DI3 MED17-221ENST00000639724 2317 ntTSL 5 BASIC18.65■□□□□ 0.58
HIST2H3AQ71DI3 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
HIST2H3AQ71DI3 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
HIST2H3AQ71DI3 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
HIST2H3AQ71DI3 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC18.64■□□□□ 0.57
HIST2H3AQ71DI3 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC18.64■□□□□ 0.57
HIST2H3AQ71DI3 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC18.64■□□□□ 0.57
HIST2H3AQ71DI3 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC18.64■□□□□ 0.57
HIST2H3AQ71DI3 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC18.64■□□□□ 0.57
HIST2H3AQ71DI3 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
HIST2H3AQ71DI3 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC18.64■□□□□ 0.57
HIST2H3AQ71DI3 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
HIST2H3AQ71DI3 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
HIST2H3AQ71DI3 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
HIST2H3AQ71DI3 AC009237.3-201ENST00000393279 1427 ntBASIC18.64■□□□□ 0.57
HIST2H3AQ71DI3 EFS-203ENST00000429593 2610 ntTSL 2 BASIC18.64■□□□□ 0.57
HIST2H3AQ71DI3 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
HIST2H3AQ71DI3 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC18.64■□□□□ 0.57
HIST2H3AQ71DI3 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
HIST2H3AQ71DI3 Z98882.1-201ENST00000622160 2253 ntBASIC18.63■□□□□ 0.57
HIST2H3AQ71DI3 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC18.63■□□□□ 0.57
HIST2H3AQ71DI3 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
HIST2H3AQ71DI3 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC18.63■□□□□ 0.57
HIST2H3AQ71DI3 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
HIST2H3AQ71DI3 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
HIST2H3AQ71DI3 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC18.63■□□□□ 0.57
HIST2H3AQ71DI3 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
HIST2H3AQ71DI3 MFF-208ENST00000409616 1247 ntTSL 5 BASIC18.63■□□□□ 0.57
HIST2H3AQ71DI3 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC18.63■□□□□ 0.57
HIST2H3AQ71DI3 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC18.63■□□□□ 0.57
HIST2H3AQ71DI3 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC18.63■□□□□ 0.57
HIST2H3AQ71DI3 RALB-208ENST00000631312 311 ntTSL 5 BASIC18.63■□□□□ 0.57
HIST2H3AQ71DI3 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC18.63■□□□□ 0.57
HIST2H3AQ71DI3 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
HIST2H3AQ71DI3 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
HIST2H3AQ71DI3 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC18.63■□□□□ 0.57
HIST2H3AQ71DI3 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
HIST2H3AQ71DI3 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
HIST2H3AQ71DI3 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC18.63■□□□□ 0.57
HIST2H3AQ71DI3 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
HIST2H3AQ71DI3 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC18.62■□□□□ 0.57
HIST2H3AQ71DI3 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC18.62■□□□□ 0.57
HIST2H3AQ71DI3 USP48-205ENST00000421625 2818 ntTSL 2 BASIC18.62■□□□□ 0.57
HIST2H3AQ71DI3 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
HIST2H3AQ71DI3 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC18.62■□□□□ 0.57
HIST2H3AQ71DI3 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC18.62■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms