Protein–RNA interactions for Protein: Q6ISU1

PTCRA, Pre T-cell antigen receptor alpha, humanhuman

Predicted RBP Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCRAQ6ISU1 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC22.2■■□□□ 1.14
PTCRAQ6ISU1 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
PTCRAQ6ISU1 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC22.2■■□□□ 1.14
PTCRAQ6ISU1 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
PTCRAQ6ISU1 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC22.2■■□□□ 1.14
PTCRAQ6ISU1 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
PTCRAQ6ISU1 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC22.2■■□□□ 1.14
PTCRAQ6ISU1 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC22.2■■□□□ 1.14
PTCRAQ6ISU1 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC22.19■■□□□ 1.14
PTCRAQ6ISU1 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC22.19■■□□□ 1.14
PTCRAQ6ISU1 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
PTCRAQ6ISU1 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC22.19■■□□□ 1.14
PTCRAQ6ISU1 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC22.19■■□□□ 1.14
PTCRAQ6ISU1 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC22.19■■□□□ 1.14
PTCRAQ6ISU1 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
PTCRAQ6ISU1 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC22.19■■□□□ 1.14
PTCRAQ6ISU1 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC22.19■■□□□ 1.14
PTCRAQ6ISU1 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
PTCRAQ6ISU1 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
PTCRAQ6ISU1 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
PTCRAQ6ISU1 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
PTCRAQ6ISU1 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC22.18■■□□□ 1.14
PTCRAQ6ISU1 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC22.18■■□□□ 1.14
PTCRAQ6ISU1 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC22.18■■□□□ 1.14
PTCRAQ6ISU1 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC22.18■■□□□ 1.14
PTCRAQ6ISU1 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC22.18■■□□□ 1.14
PTCRAQ6ISU1 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
PTCRAQ6ISU1 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC22.18■■□□□ 1.14
PTCRAQ6ISU1 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC22.18■■□□□ 1.14
PTCRAQ6ISU1 PBX1-209ENST00000485769 834 ntTSL 2 BASIC22.18■■□□□ 1.14
PTCRAQ6ISU1 AC079089.2-201ENST00000531211 1277 ntBASIC22.18■■□□□ 1.14
PTCRAQ6ISU1 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC22.18■■□□□ 1.14
PTCRAQ6ISU1 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
PTCRAQ6ISU1 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC22.18■■□□□ 1.14
PTCRAQ6ISU1 AC008175.2-201ENST00000612840 297 ntBASIC22.18■■□□□ 1.14
PTCRAQ6ISU1 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
PTCRAQ6ISU1 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
PTCRAQ6ISU1 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC22.17■■□□□ 1.14
PTCRAQ6ISU1 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
PTCRAQ6ISU1 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC22.17■■□□□ 1.14
PTCRAQ6ISU1 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC22.17■■□□□ 1.14
PTCRAQ6ISU1 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC22.17■■□□□ 1.14
PTCRAQ6ISU1 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC22.17■■□□□ 1.14
PTCRAQ6ISU1 AC060766.5-201ENST00000590539 871 ntBASIC22.17■■□□□ 1.14
PTCRAQ6ISU1 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC22.17■■□□□ 1.14
PTCRAQ6ISU1 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC22.17■■□□□ 1.14
PTCRAQ6ISU1 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC22.17■■□□□ 1.14
PTCRAQ6ISU1 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC22.17■■□□□ 1.14
PTCRAQ6ISU1 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC22.17■■□□□ 1.14
PTCRAQ6ISU1 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
PTCRAQ6ISU1 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC22.16■■□□□ 1.14
PTCRAQ6ISU1 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC22.16■■□□□ 1.14
PTCRAQ6ISU1 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC22.16■■□□□ 1.14
PTCRAQ6ISU1 KRT17P3-201ENST00000420566 1262 ntBASIC22.16■■□□□ 1.14
PTCRAQ6ISU1 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC22.16■■□□□ 1.14
PTCRAQ6ISU1 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC22.16■■□□□ 1.14
PTCRAQ6ISU1 BX088651.1-201ENST00000540551 451 ntBASIC22.16■■□□□ 1.14
PTCRAQ6ISU1 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC22.16■■□□□ 1.14
PTCRAQ6ISU1 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC22.16■■□□□ 1.14
PTCRAQ6ISU1 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
PTCRAQ6ISU1 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
PTCRAQ6ISU1 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
PTCRAQ6ISU1 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
PTCRAQ6ISU1 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
PTCRAQ6ISU1 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
PTCRAQ6ISU1 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
PTCRAQ6ISU1 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC22.15■■□□□ 1.14
PTCRAQ6ISU1 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC22.15■■□□□ 1.14
PTCRAQ6ISU1 ABHD17AP6-201ENST00000458502 1044 ntBASIC22.15■■□□□ 1.14
PTCRAQ6ISU1 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC22.15■■□□□ 1.14
PTCRAQ6ISU1 RN7SL471P-201ENST00000580476 299 ntBASIC22.15■■□□□ 1.14
PTCRAQ6ISU1 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC22.15■■□□□ 1.14
PTCRAQ6ISU1 RBM17P2-201ENST00000616397 1405 ntBASIC22.14■■□□□ 1.14
PTCRAQ6ISU1 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC22.14■■□□□ 1.14
PTCRAQ6ISU1 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC22.14■■□□□ 1.14
PTCRAQ6ISU1 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
PTCRAQ6ISU1 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC22.14■■□□□ 1.13
PTCRAQ6ISU1 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC22.14■■□□□ 1.13
PTCRAQ6ISU1 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC22.14■■□□□ 1.13
PTCRAQ6ISU1 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
PTCRAQ6ISU1 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC22.14■■□□□ 1.13
PTCRAQ6ISU1 HLA-B-256ENST00000639848 1089 ntBASIC22.14■■□□□ 1.13
PTCRAQ6ISU1 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC22.14■■□□□ 1.13
PTCRAQ6ISU1 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC22.14■■□□□ 1.13
PTCRAQ6ISU1 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
PTCRAQ6ISU1 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC22.13■■□□□ 1.13
PTCRAQ6ISU1 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
PTCRAQ6ISU1 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC22.13■■□□□ 1.13
PTCRAQ6ISU1 NME6-213ENST00000451657 871 ntTSL 2 BASIC22.13■■□□□ 1.13
PTCRAQ6ISU1 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
PTCRAQ6ISU1 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC22.13■■□□□ 1.13
PTCRAQ6ISU1 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC22.13■■□□□ 1.13
PTCRAQ6ISU1 FGF8-207ENST00000618991 856 ntTSL 3 BASIC22.13■■□□□ 1.13
PTCRAQ6ISU1 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
PTCRAQ6ISU1 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
PTCRAQ6ISU1 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
PTCRAQ6ISU1 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
PTCRAQ6ISU1 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC22.12■■□□□ 1.13
PTCRAQ6ISU1 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC22.12■■□□□ 1.13
PTCRAQ6ISU1 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC22.12■■□□□ 1.13
Retrieved 100 of 98,524 protein–RNA pairs in 17.5 ms