Protein–RNA interactions for Protein: Q6A162

KRT40, Keratin, type I cytoskeletal 40, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT40Q6A162 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
KRT40Q6A162 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC24.66■■□□□ 1.54
KRT40Q6A162 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC24.66■■□□□ 1.54
KRT40Q6A162 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
KRT40Q6A162 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
KRT40Q6A162 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC24.66■■□□□ 1.54
KRT40Q6A162 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
KRT40Q6A162 AC026310.3-201ENST00000625186 2373 ntBASIC24.66■■□□□ 1.54
KRT40Q6A162 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC24.66■■□□□ 1.54
KRT40Q6A162 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
KRT40Q6A162 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC24.66■■□□□ 1.54
KRT40Q6A162 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC24.65■■□□□ 1.54
KRT40Q6A162 PXK-203ENST00000383715 1756 ntTSL 5 BASIC24.65■■□□□ 1.54
KRT40Q6A162 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC24.65■■□□□ 1.54
KRT40Q6A162 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
KRT40Q6A162 ID1-201ENST00000376105 1233 ntBASIC24.65■■□□□ 1.54
KRT40Q6A162 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC24.65■■□□□ 1.54
KRT40Q6A162 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC24.65■■□□□ 1.54
KRT40Q6A162 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC24.65■■□□□ 1.54
KRT40Q6A162 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
KRT40Q6A162 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC24.65■■□□□ 1.54
KRT40Q6A162 AP006587.3-201ENST00000525742 1516 ntBASIC24.65■■□□□ 1.54
KRT40Q6A162 TUB-203ENST00000534099 1759 ntTSL 2 BASIC24.65■■□□□ 1.54
KRT40Q6A162 AC003102.1-202ENST00000563394 1796 ntBASIC24.65■■□□□ 1.54
KRT40Q6A162 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC24.64■■□□□ 1.54
KRT40Q6A162 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC24.64■■□□□ 1.54
KRT40Q6A162 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC24.64■■□□□ 1.54
KRT40Q6A162 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC24.64■■□□□ 1.54
KRT40Q6A162 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC24.64■■□□□ 1.54
KRT40Q6A162 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC24.64■■□□□ 1.53
KRT40Q6A162 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC24.64■■□□□ 1.53
KRT40Q6A162 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC24.64■■□□□ 1.53
KRT40Q6A162 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC24.64■■□□□ 1.53
KRT40Q6A162 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC24.63■■□□□ 1.53
KRT40Q6A162 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
KRT40Q6A162 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
KRT40Q6A162 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
KRT40Q6A162 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
KRT40Q6A162 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC24.63■■□□□ 1.53
KRT40Q6A162 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC24.63■■□□□ 1.53
KRT40Q6A162 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC24.63■■□□□ 1.53
KRT40Q6A162 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC24.63■■□□□ 1.53
KRT40Q6A162 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC24.63■■□□□ 1.53
KRT40Q6A162 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
KRT40Q6A162 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
KRT40Q6A162 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC24.62■■□□□ 1.53
KRT40Q6A162 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC24.62■■□□□ 1.53
KRT40Q6A162 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC24.62■■□□□ 1.53
KRT40Q6A162 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
KRT40Q6A162 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC24.62■■□□□ 1.53
KRT40Q6A162 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
KRT40Q6A162 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC24.61■■□□□ 1.53
KRT40Q6A162 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC24.61■■□□□ 1.53
KRT40Q6A162 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC24.61■■□□□ 1.53
KRT40Q6A162 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC24.61■■□□□ 1.53
KRT40Q6A162 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC24.61■■□□□ 1.53
KRT40Q6A162 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC24.61■■□□□ 1.53
KRT40Q6A162 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC24.61■■□□□ 1.53
KRT40Q6A162 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC24.61■■□□□ 1.53
KRT40Q6A162 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
KRT40Q6A162 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
KRT40Q6A162 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC24.6■■□□□ 1.53
KRT40Q6A162 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
KRT40Q6A162 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
KRT40Q6A162 AK1-201ENST00000223836 736 ntTSL 3 BASIC24.6■■□□□ 1.53
KRT40Q6A162 DLX3-202ENST00000512495 834 ntTSL 2 BASIC24.6■■□□□ 1.53
KRT40Q6A162 DUX4L2-201ENST00000561772 1275 ntBASIC24.6■■□□□ 1.53
KRT40Q6A162 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC24.6■■□□□ 1.53
KRT40Q6A162 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC24.6■■□□□ 1.53
KRT40Q6A162 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC24.6■■□□□ 1.53
KRT40Q6A162 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC24.6■■□□□ 1.53
KRT40Q6A162 DUX4L6-201ENST00000626483 1275 ntBASIC24.6■■□□□ 1.53
KRT40Q6A162 DUX4L1-201ENST00000627662 1275 ntBASIC24.6■■□□□ 1.53
KRT40Q6A162 DUX4L8-201ENST00000629013 1275 ntBASIC24.6■■□□□ 1.53
KRT40Q6A162 DUX4L3-201ENST00000630187 1275 ntBASIC24.6■■□□□ 1.53
KRT40Q6A162 DUX4L7-201ENST00000630678 1275 ntBASIC24.6■■□□□ 1.53
KRT40Q6A162 DUX4L5-201ENST00000630834 1275 ntBASIC24.6■■□□□ 1.53
KRT40Q6A162 Z98882.1-201ENST00000622160 2253 ntBASIC24.6■■□□□ 1.53
KRT40Q6A162 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
KRT40Q6A162 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC24.6■■□□□ 1.53
KRT40Q6A162 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
KRT40Q6A162 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
KRT40Q6A162 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC24.59■■□□□ 1.53
KRT40Q6A162 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC24.59■■□□□ 1.53
KRT40Q6A162 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
KRT40Q6A162 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
KRT40Q6A162 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC24.59■■□□□ 1.53
KRT40Q6A162 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC24.59■■□□□ 1.53
KRT40Q6A162 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
KRT40Q6A162 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC24.59■■□□□ 1.53
KRT40Q6A162 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC24.59■■□□□ 1.53
KRT40Q6A162 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC24.59■■□□□ 1.53
KRT40Q6A162 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC24.59■■□□□ 1.53
KRT40Q6A162 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC24.59■■□□□ 1.53
KRT40Q6A162 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
KRT40Q6A162 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC24.59■■□□□ 1.53
KRT40Q6A162 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
KRT40Q6A162 AL137060.1-201ENST00000618151 2648 ntBASIC24.59■■□□□ 1.53
KRT40Q6A162 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
KRT40Q6A162 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC24.58■■□□□ 1.53
Retrieved 100 of 98,524 protein–RNA pairs in 23.5 ms