Protein–RNA interactions for Protein: Q5TAT6

COL13A1, Collagen alpha-1(XIII) chain, humanhuman

Predicted RBP Predictions only

Length 717 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1Q5TAT6 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
COL13A1Q5TAT6 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
COL13A1Q5TAT6 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC24.47■■□□□ 1.51
COL13A1Q5TAT6 EI24-204ENST00000527235 1625 ntTSL 5 BASIC24.47■■□□□ 1.51
COL13A1Q5TAT6 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
COL13A1Q5TAT6 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
COL13A1Q5TAT6 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
COL13A1Q5TAT6 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
COL13A1Q5TAT6 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC24.47■■□□□ 1.51
COL13A1Q5TAT6 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC24.47■■□□□ 1.51
COL13A1Q5TAT6 AC091076.1-201ENST00000610741 619 ntBASIC24.47■■□□□ 1.51
COL13A1Q5TAT6 DECR2-212ENST00000627716 352 ntTSL 2 BASIC24.47■■□□□ 1.51
COL13A1Q5TAT6 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC24.47■■□□□ 1.51
COL13A1Q5TAT6 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC24.47■■□□□ 1.51
COL13A1Q5TAT6 AC092368.3-202ENST00000574180 1591 ntBASIC24.46■■□□□ 1.51
COL13A1Q5TAT6 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC24.46■■□□□ 1.51
COL13A1Q5TAT6 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC24.46■■□□□ 1.51
COL13A1Q5TAT6 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
COL13A1Q5TAT6 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
COL13A1Q5TAT6 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC24.46■■□□□ 1.51
COL13A1Q5TAT6 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC24.46■■□□□ 1.51
COL13A1Q5TAT6 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC24.46■■□□□ 1.51
COL13A1Q5TAT6 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC24.46■■□□□ 1.51
COL13A1Q5TAT6 KRT17P1-201ENST00000399211 1546 ntBASIC24.45■■□□□ 1.51
COL13A1Q5TAT6 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC24.45■■□□□ 1.51
COL13A1Q5TAT6 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC24.45■■□□□ 1.51
COL13A1Q5TAT6 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC24.45■■□□□ 1.5
COL13A1Q5TAT6 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC24.45■■□□□ 1.5
COL13A1Q5TAT6 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
COL13A1Q5TAT6 TERF1P1-201ENST00000311003 1181 ntBASIC24.45■■□□□ 1.5
COL13A1Q5TAT6 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
COL13A1Q5TAT6 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC24.45■■□□□ 1.5
COL13A1Q5TAT6 CRYGFP-201ENST00000418459 633 ntBASIC24.45■■□□□ 1.5
COL13A1Q5TAT6 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC24.45■■□□□ 1.5
COL13A1Q5TAT6 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC24.45■■□□□ 1.5
COL13A1Q5TAT6 AC124016.1-201ENST00000609552 612 ntBASIC24.45■■□□□ 1.5
COL13A1Q5TAT6 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC24.45■■□□□ 1.5
COL13A1Q5TAT6 Six3os1_6.1-201ENST00000620790 196 ntBASIC24.45■■□□□ 1.5
COL13A1Q5TAT6 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
COL13A1Q5TAT6 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC24.44■■□□□ 1.5
COL13A1Q5TAT6 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC24.44■■□□□ 1.5
COL13A1Q5TAT6 LY6E-205ENST00000519611 635 ntTSL 3 BASIC24.44■■□□□ 1.5
COL13A1Q5TAT6 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC24.44■■□□□ 1.5
COL13A1Q5TAT6 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC24.44■■□□□ 1.5
COL13A1Q5TAT6 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC24.44■■□□□ 1.5
COL13A1Q5TAT6 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC24.44■■□□□ 1.5
COL13A1Q5TAT6 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC24.44■■□□□ 1.5
COL13A1Q5TAT6 GLTP-201ENST00000318348 2356 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
COL13A1Q5TAT6 AL161729.1-201ENST00000604104 1402 ntBASIC24.44■■□□□ 1.5
COL13A1Q5TAT6 AC073508.3-201ENST00000619697 1419 ntBASIC24.44■■□□□ 1.5
COL13A1Q5TAT6 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
COL13A1Q5TAT6 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
COL13A1Q5TAT6 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC24.43■■□□□ 1.5
COL13A1Q5TAT6 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC24.43■■□□□ 1.5
COL13A1Q5TAT6 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
COL13A1Q5TAT6 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC24.43■■□□□ 1.5
COL13A1Q5TAT6 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC24.43■■□□□ 1.5
COL13A1Q5TAT6 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
COL13A1Q5TAT6 AP003071.4-201ENST00000562276 1284 ntBASIC24.43■■□□□ 1.5
COL13A1Q5TAT6 AL031963.3-201ENST00000606441 850 ntBASIC24.43■■□□□ 1.5
COL13A1Q5TAT6 AC026471.5-201ENST00000615068 467 ntBASIC24.43■■□□□ 1.5
COL13A1Q5TAT6 AC105020.6-201ENST00000621523 1217 ntBASIC24.43■■□□□ 1.5
COL13A1Q5TAT6 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
COL13A1Q5TAT6 CBX4-201ENST00000269397 2664 ntAPPRIS P2 TSL 1 (best) BASIC24.43■■□□□ 1.5
COL13A1Q5TAT6 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC24.42■■□□□ 1.5
COL13A1Q5TAT6 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC24.42■■□□□ 1.5
COL13A1Q5TAT6 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
COL13A1Q5TAT6 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
COL13A1Q5TAT6 POM121L13P-201ENST00000422362 380 ntBASIC24.42■■□□□ 1.5
COL13A1Q5TAT6 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
COL13A1Q5TAT6 AL137013.1-201ENST00000432946 1228 ntBASIC24.42■■□□□ 1.5
COL13A1Q5TAT6 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
COL13A1Q5TAT6 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC24.42■■□□□ 1.5
COL13A1Q5TAT6 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC24.42■■□□□ 1.5
COL13A1Q5TAT6 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC24.42■■□□□ 1.5
COL13A1Q5TAT6 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC24.42■■□□□ 1.5
COL13A1Q5TAT6 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC24.42■■□□□ 1.5
COL13A1Q5TAT6 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC24.42■■□□□ 1.5
COL13A1Q5TAT6 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC24.42■■□□□ 1.5
COL13A1Q5TAT6 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
COL13A1Q5TAT6 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC24.42■■□□□ 1.5
COL13A1Q5TAT6 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC24.41■■□□□ 1.5
COL13A1Q5TAT6 LRRC10B-201ENST00000378075 2219 ntAPPRIS P1 BASIC24.41■■□□□ 1.5
COL13A1Q5TAT6 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
COL13A1Q5TAT6 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC24.41■■□□□ 1.5
COL13A1Q5TAT6 IPPK-202ENST00000375522 882 ntTSL 3 BASIC24.41■■□□□ 1.5
COL13A1Q5TAT6 SERF2-207ENST00000409614 582 ntTSL 2 BASIC24.41■■□□□ 1.5
COL13A1Q5TAT6 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC24.41■■□□□ 1.5
COL13A1Q5TAT6 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC24.41■■□□□ 1.5
COL13A1Q5TAT6 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC24.41■■□□□ 1.5
COL13A1Q5TAT6 OR2A1-AS1-207ENST00000486094 819 ntBASIC24.41■■□□□ 1.5
COL13A1Q5TAT6 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC24.41■■□□□ 1.5
COL13A1Q5TAT6 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC24.41■■□□□ 1.5
COL13A1Q5TAT6 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC24.41■■□□□ 1.5
COL13A1Q5TAT6 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC24.41■■□□□ 1.5
COL13A1Q5TAT6 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC24.4■■□□□ 1.5
COL13A1Q5TAT6 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC24.4■■□□□ 1.5
COL13A1Q5TAT6 ANKRD13D-211ENST00000511455 2139 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
COL13A1Q5TAT6 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC24.4■■□□□ 1.5
COL13A1Q5TAT6 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
Retrieved 100 of 98,524 protein–RNA pairs in 22.1 ms