Protein–RNA interactions for Protein: Q5M7Z0

RNFT1, E3 ubiquitin-protein ligase RNFT1, humanhuman

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNFT1Q5M7Z0 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
RNFT1Q5M7Z0 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RNFT1Q5M7Z0 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RNFT1Q5M7Z0 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RNFT1Q5M7Z0 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC19.23■□□□□ 0.67
RNFT1Q5M7Z0 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC19.23■□□□□ 0.67
RNFT1Q5M7Z0 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC19.23■□□□□ 0.67
RNFT1Q5M7Z0 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RNFT1Q5M7Z0 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
RNFT1Q5M7Z0 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RNFT1Q5M7Z0 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC19.23■□□□□ 0.67
RNFT1Q5M7Z0 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
RNFT1Q5M7Z0 SLC7A5P1-201ENST00000568957 537 ntBASIC19.23■□□□□ 0.67
RNFT1Q5M7Z0 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC19.23■□□□□ 0.67
RNFT1Q5M7Z0 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RNFT1Q5M7Z0 C1orf229-201ENST00000623686 2258 ntBASIC19.23■□□□□ 0.67
RNFT1Q5M7Z0 PKM-204ENST00000449901 2526 ntTSL 2 BASIC19.23■□□□□ 0.67
RNFT1Q5M7Z0 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RNFT1Q5M7Z0 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC19.23■□□□□ 0.67
RNFT1Q5M7Z0 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC19.23■□□□□ 0.67
RNFT1Q5M7Z0 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
RNFT1Q5M7Z0 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RNFT1Q5M7Z0 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RNFT1Q5M7Z0 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
RNFT1Q5M7Z0 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RNFT1Q5M7Z0 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RNFT1Q5M7Z0 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
RNFT1Q5M7Z0 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC19.22■□□□□ 0.67
RNFT1Q5M7Z0 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
RNFT1Q5M7Z0 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
RNFT1Q5M7Z0 APTR-203ENST00000430801 583 ntTSL 5 BASIC19.22■□□□□ 0.67
RNFT1Q5M7Z0 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC19.22■□□□□ 0.67
RNFT1Q5M7Z0 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
RNFT1Q5M7Z0 AL138781.1-201ENST00000566567 1274 ntBASIC19.22■□□□□ 0.67
RNFT1Q5M7Z0 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC19.22■□□□□ 0.67
RNFT1Q5M7Z0 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RNFT1Q5M7Z0 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC19.22■□□□□ 0.67
RNFT1Q5M7Z0 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
RNFT1Q5M7Z0 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC19.22■□□□□ 0.67
RNFT1Q5M7Z0 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RNFT1Q5M7Z0 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
RNFT1Q5M7Z0 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
RNFT1Q5M7Z0 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
RNFT1Q5M7Z0 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RNFT1Q5M7Z0 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC19.21■□□□□ 0.67
RNFT1Q5M7Z0 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RNFT1Q5M7Z0 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
RNFT1Q5M7Z0 BMP1-204ENST00000397814 836 ntTSL 4 BASIC19.21■□□□□ 0.67
RNFT1Q5M7Z0 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC19.21■□□□□ 0.67
RNFT1Q5M7Z0 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RNFT1Q5M7Z0 TERF1P5-201ENST00000477545 1207 ntBASIC19.21■□□□□ 0.67
RNFT1Q5M7Z0 RNF146-206ENST00000480444 843 ntTSL 2 BASIC19.21■□□□□ 0.67
RNFT1Q5M7Z0 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC19.21■□□□□ 0.67
RNFT1Q5M7Z0 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
RNFT1Q5M7Z0 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC19.21■□□□□ 0.67
RNFT1Q5M7Z0 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC19.21■□□□□ 0.67
RNFT1Q5M7Z0 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
RNFT1Q5M7Z0 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
RNFT1Q5M7Z0 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC19.21■□□□□ 0.67
RNFT1Q5M7Z0 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
RNFT1Q5M7Z0 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC19.2■□□□□ 0.66
RNFT1Q5M7Z0 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC19.2■□□□□ 0.66
RNFT1Q5M7Z0 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RNFT1Q5M7Z0 APTR-205ENST00000447009 902 ntTSL 2 BASIC19.2■□□□□ 0.66
RNFT1Q5M7Z0 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC19.2■□□□□ 0.66
RNFT1Q5M7Z0 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
RNFT1Q5M7Z0 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
RNFT1Q5M7Z0 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
RNFT1Q5M7Z0 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
RNFT1Q5M7Z0 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
RNFT1Q5M7Z0 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
RNFT1Q5M7Z0 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RNFT1Q5M7Z0 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
RNFT1Q5M7Z0 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC19.19■□□□□ 0.66
RNFT1Q5M7Z0 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC19.19■□□□□ 0.66
RNFT1Q5M7Z0 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
RNFT1Q5M7Z0 AC080038.3-201ENST00000623346 1952 ntBASIC19.19■□□□□ 0.66
RNFT1Q5M7Z0 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC19.19■□□□□ 0.66
RNFT1Q5M7Z0 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC19.19■□□□□ 0.66
RNFT1Q5M7Z0 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
RNFT1Q5M7Z0 AC013268.1-206ENST00000638368 961 ntBASIC19.19■□□□□ 0.66
RNFT1Q5M7Z0 AC112229.1-201ENST00000639295 961 ntBASIC19.19■□□□□ 0.66
RNFT1Q5M7Z0 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC19.19■□□□□ 0.66
RNFT1Q5M7Z0 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
RNFT1Q5M7Z0 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RNFT1Q5M7Z0 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
RNFT1Q5M7Z0 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC19.18■□□□□ 0.66
RNFT1Q5M7Z0 ME2-208ENST00000638937 2471 ntTSL 5 BASIC19.18■□□□□ 0.66
RNFT1Q5M7Z0 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
RNFT1Q5M7Z0 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC19.18■□□□□ 0.66
RNFT1Q5M7Z0 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC19.18■□□□□ 0.66
RNFT1Q5M7Z0 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
RNFT1Q5M7Z0 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC19.18■□□□□ 0.66
RNFT1Q5M7Z0 AF201337.1-201ENST00000520239 748 ntBASIC19.18■□□□□ 0.66
RNFT1Q5M7Z0 AC105036.2-201ENST00000569468 176 ntBASIC19.18■□□□□ 0.66
RNFT1Q5M7Z0 AC133552.2-202ENST00000575694 574 ntBASIC19.18■□□□□ 0.66
RNFT1Q5M7Z0 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC19.18■□□□□ 0.66
RNFT1Q5M7Z0 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
RNFT1Q5M7Z0 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
RNFT1Q5M7Z0 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms