Protein–RNA interactions for Protein: Q59EK9

RUNDC3A, RUN domain-containing protein 3A, humanhuman

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RUNDC3AQ59EK9 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
RUNDC3AQ59EK9 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
RUNDC3AQ59EK9 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
RUNDC3AQ59EK9 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC20.07■□□□□ 0.8
RUNDC3AQ59EK9 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC20.07■□□□□ 0.8
RUNDC3AQ59EK9 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC20.07■□□□□ 0.8
RUNDC3AQ59EK9 AC003102.1-202ENST00000563394 1796 ntBASIC20.07■□□□□ 0.8
RUNDC3AQ59EK9 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
RUNDC3AQ59EK9 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
RUNDC3AQ59EK9 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
RUNDC3AQ59EK9 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
RUNDC3AQ59EK9 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
RUNDC3AQ59EK9 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
RUNDC3AQ59EK9 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
RUNDC3AQ59EK9 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
RUNDC3AQ59EK9 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC20.06■□□□□ 0.8
RUNDC3AQ59EK9 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC20.06■□□□□ 0.8
RUNDC3AQ59EK9 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
RUNDC3AQ59EK9 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
RUNDC3AQ59EK9 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
RUNDC3AQ59EK9 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
RUNDC3AQ59EK9 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC20.06■□□□□ 0.8
RUNDC3AQ59EK9 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
RUNDC3AQ59EK9 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC20.06■□□□□ 0.8
RUNDC3AQ59EK9 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
RUNDC3AQ59EK9 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
RUNDC3AQ59EK9 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC20.06■□□□□ 0.8
RUNDC3AQ59EK9 PARN-205ENST00000539279 1557 ntTSL 2 BASIC20.06■□□□□ 0.8
RUNDC3AQ59EK9 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
RUNDC3AQ59EK9 AC092171.4-201ENST00000609130 632 ntBASIC20.06■□□□□ 0.8
RUNDC3AQ59EK9 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC20.06■□□□□ 0.8
RUNDC3AQ59EK9 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
RUNDC3AQ59EK9 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
RUNDC3AQ59EK9 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
RUNDC3AQ59EK9 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
RUNDC3AQ59EK9 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC20.05■□□□□ 0.8
RUNDC3AQ59EK9 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
RUNDC3AQ59EK9 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC20.05■□□□□ 0.8
RUNDC3AQ59EK9 SRD5A1P1-201ENST00000442297 786 ntBASIC20.05■□□□□ 0.8
RUNDC3AQ59EK9 AP004607.7-201ENST00000527152 1677 ntBASIC20.05■□□□□ 0.8
RUNDC3AQ59EK9 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC20.05■□□□□ 0.8
RUNDC3AQ59EK9 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC20.05■□□□□ 0.8
RUNDC3AQ59EK9 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
RUNDC3AQ59EK9 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
RUNDC3AQ59EK9 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
RUNDC3AQ59EK9 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC20.05■□□□□ 0.8
RUNDC3AQ59EK9 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
RUNDC3AQ59EK9 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
RUNDC3AQ59EK9 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
RUNDC3AQ59EK9 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC20.04■□□□□ 0.8
RUNDC3AQ59EK9 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
RUNDC3AQ59EK9 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
RUNDC3AQ59EK9 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
RUNDC3AQ59EK9 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
RUNDC3AQ59EK9 QDPR-206ENST00000508623 601 ntTSL 3 BASIC20.04■□□□□ 0.8
RUNDC3AQ59EK9 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
RUNDC3AQ59EK9 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC20.04■□□□□ 0.8
RUNDC3AQ59EK9 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC20.04■□□□□ 0.8
RUNDC3AQ59EK9 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
RUNDC3AQ59EK9 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
RUNDC3AQ59EK9 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
RUNDC3AQ59EK9 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
RUNDC3AQ59EK9 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
RUNDC3AQ59EK9 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
RUNDC3AQ59EK9 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
RUNDC3AQ59EK9 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
RUNDC3AQ59EK9 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
RUNDC3AQ59EK9 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
RUNDC3AQ59EK9 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC20.03■□□□□ 0.8
RUNDC3AQ59EK9 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC20.03■□□□□ 0.8
RUNDC3AQ59EK9 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
RUNDC3AQ59EK9 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
RUNDC3AQ59EK9 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
RUNDC3AQ59EK9 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC20.03■□□□□ 0.8
RUNDC3AQ59EK9 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
RUNDC3AQ59EK9 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
RUNDC3AQ59EK9 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
RUNDC3AQ59EK9 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
RUNDC3AQ59EK9 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
RUNDC3AQ59EK9 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
RUNDC3AQ59EK9 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC20.02■□□□□ 0.8
RUNDC3AQ59EK9 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
RUNDC3AQ59EK9 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC20.02■□□□□ 0.8
RUNDC3AQ59EK9 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC20.02■□□□□ 0.8
RUNDC3AQ59EK9 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC20.02■□□□□ 0.8
RUNDC3AQ59EK9 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
RUNDC3AQ59EK9 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
RUNDC3AQ59EK9 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC20.02■□□□□ 0.8
RUNDC3AQ59EK9 HES6-206ENST00000409574 738 ntTSL 2 BASIC20.02■□□□□ 0.8
RUNDC3AQ59EK9 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
RUNDC3AQ59EK9 AL512631.2-201ENST00000604634 923 ntBASIC20.02■□□□□ 0.8
RUNDC3AQ59EK9 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC20.02■□□□□ 0.8
RUNDC3AQ59EK9 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
RUNDC3AQ59EK9 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
RUNDC3AQ59EK9 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC20.02■□□□□ 0.8
RUNDC3AQ59EK9 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
RUNDC3AQ59EK9 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC20.02■□□□□ 0.79
RUNDC3AQ59EK9 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC20.02■□□□□ 0.79
RUNDC3AQ59EK9 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
RUNDC3AQ59EK9 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC20.02■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms