Protein–RNA interactions for Protein: Q29RF7

PDS5A, Sister chromatid cohesion protein PDS5 homolog A, humanhuman

Known RBP Predictions only

Length 1,337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDS5AQ29RF7 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC25.7■■□□□ 1.71
PDS5AQ29RF7 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC25.7■■□□□ 1.71
PDS5AQ29RF7 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC25.7■■□□□ 1.71
PDS5AQ29RF7 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
PDS5AQ29RF7 ME2-208ENST00000638937 2471 ntTSL 5 BASIC25.7■■□□□ 1.7
PDS5AQ29RF7 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC25.7■■□□□ 1.7
PDS5AQ29RF7 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC25.7■■□□□ 1.7
PDS5AQ29RF7 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
PDS5AQ29RF7 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC25.69■■□□□ 1.7
PDS5AQ29RF7 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC25.69■■□□□ 1.7
PDS5AQ29RF7 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC25.69■■□□□ 1.7
PDS5AQ29RF7 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC25.69■■□□□ 1.7
PDS5AQ29RF7 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC25.69■■□□□ 1.7
PDS5AQ29RF7 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC25.69■■□□□ 1.7
PDS5AQ29RF7 AC007322.4-201ENST00000509611 723 ntBASIC25.69■■□□□ 1.7
PDS5AQ29RF7 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC25.69■■□□□ 1.7
PDS5AQ29RF7 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC25.69■■□□□ 1.7
PDS5AQ29RF7 AC008175.2-201ENST00000612840 297 ntBASIC25.69■■□□□ 1.7
PDS5AQ29RF7 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC25.69■■□□□ 1.7
PDS5AQ29RF7 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC25.69■■□□□ 1.7
PDS5AQ29RF7 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC25.69■■□□□ 1.7
PDS5AQ29RF7 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC25.69■■□□□ 1.7
PDS5AQ29RF7 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC25.69■■□□□ 1.7
PDS5AQ29RF7 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC25.69■■□□□ 1.7
PDS5AQ29RF7 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
PDS5AQ29RF7 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC25.68■■□□□ 1.7
PDS5AQ29RF7 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
PDS5AQ29RF7 SLC7A5P2-201ENST00000553010 536 ntBASIC25.68■■□□□ 1.7
PDS5AQ29RF7 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC25.68■■□□□ 1.7
PDS5AQ29RF7 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
PDS5AQ29RF7 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
PDS5AQ29RF7 AC013268.1-206ENST00000638368 961 ntBASIC25.68■■□□□ 1.7
PDS5AQ29RF7 AC112229.1-201ENST00000639295 961 ntBASIC25.68■■□□□ 1.7
PDS5AQ29RF7 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC25.68■■□□□ 1.7
PDS5AQ29RF7 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC25.68■■□□□ 1.7
PDS5AQ29RF7 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC25.68■■□□□ 1.7
PDS5AQ29RF7 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC25.68■■□□□ 1.7
PDS5AQ29RF7 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC25.68■■□□□ 1.7
PDS5AQ29RF7 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC25.68■■□□□ 1.7
PDS5AQ29RF7 KRT16P2-201ENST00000414673 1423 ntBASIC25.67■■□□□ 1.7
PDS5AQ29RF7 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC25.67■■□□□ 1.7
PDS5AQ29RF7 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC25.67■■□□□ 1.7
PDS5AQ29RF7 EMC9-206ENST00000560403 872 ntTSL 2 BASIC25.67■■□□□ 1.7
PDS5AQ29RF7 AC005181.1-201ENST00000604782 1256 ntBASIC25.67■■□□□ 1.7
PDS5AQ29RF7 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC25.67■■□□□ 1.7
PDS5AQ29RF7 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
PDS5AQ29RF7 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC25.67■■□□□ 1.7
PDS5AQ29RF7 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
PDS5AQ29RF7 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
PDS5AQ29RF7 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
PDS5AQ29RF7 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC25.67■■□□□ 1.7
PDS5AQ29RF7 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC25.66■■□□□ 1.7
PDS5AQ29RF7 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
PDS5AQ29RF7 C9orf163-202ENST00000624034 2573 ntBASIC25.66■■□□□ 1.7
PDS5AQ29RF7 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
PDS5AQ29RF7 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC25.66■■□□□ 1.7
PDS5AQ29RF7 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC25.66■■□□□ 1.7
PDS5AQ29RF7 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC25.66■■□□□ 1.7
PDS5AQ29RF7 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC25.65■■□□□ 1.7
PDS5AQ29RF7 APTR-203ENST00000430801 583 ntTSL 5 BASIC25.65■■□□□ 1.7
PDS5AQ29RF7 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC25.65■■□□□ 1.7
PDS5AQ29RF7 TERF1P5-201ENST00000477545 1207 ntBASIC25.65■■□□□ 1.7
PDS5AQ29RF7 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
PDS5AQ29RF7 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC25.65■■□□□ 1.7
PDS5AQ29RF7 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
PDS5AQ29RF7 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC25.65■■□□□ 1.7
PDS5AQ29RF7 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC25.65■■□□□ 1.7
PDS5AQ29RF7 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
PDS5AQ29RF7 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC25.65■■□□□ 1.7
PDS5AQ29RF7 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
PDS5AQ29RF7 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
PDS5AQ29RF7 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC25.65■■□□□ 1.7
PDS5AQ29RF7 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC25.64■■□□□ 1.7
PDS5AQ29RF7 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC25.64■■□□□ 1.7
PDS5AQ29RF7 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC25.64■■□□□ 1.7
PDS5AQ29RF7 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC25.64■■□□□ 1.7
PDS5AQ29RF7 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC25.64■■□□□ 1.7
PDS5AQ29RF7 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC25.64■■□□□ 1.7
PDS5AQ29RF7 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC25.64■■□□□ 1.7
PDS5AQ29RF7 AC120498.10-201ENST00000621827 505 ntBASIC25.64■■□□□ 1.7
PDS5AQ29RF7 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
PDS5AQ29RF7 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC25.64■■□□□ 1.7
PDS5AQ29RF7 RARG-204ENST00000543726 1779 ntTSL 2 BASIC25.64■■□□□ 1.7
PDS5AQ29RF7 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC25.64■■□□□ 1.7
PDS5AQ29RF7 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC25.64■■□□□ 1.7
PDS5AQ29RF7 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC25.64■■□□□ 1.69
PDS5AQ29RF7 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC25.64■■□□□ 1.69
PDS5AQ29RF7 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC25.64■■□□□ 1.69
PDS5AQ29RF7 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC25.63■■□□□ 1.69
PDS5AQ29RF7 GPX1P1-201ENST00000388829 606 ntBASIC25.63■■□□□ 1.69
PDS5AQ29RF7 AL121832.2-201ENST00000610979 668 ntBASIC25.63■■□□□ 1.69
PDS5AQ29RF7 AL109923.1-201ENST00000618799 583 ntBASIC25.63■■□□□ 1.69
PDS5AQ29RF7 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC25.63■■□□□ 1.69
PDS5AQ29RF7 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC25.63■■□□□ 1.69
PDS5AQ29RF7 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC25.63■■□□□ 1.69
PDS5AQ29RF7 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
PDS5AQ29RF7 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC25.63■■□□□ 1.69
PDS5AQ29RF7 GUSBP6-202ENST00000438529 1198 ntBASIC25.63■■□□□ 1.69
PDS5AQ29RF7 DENND3-207ENST00000518347 850 ntTSL 2 BASIC25.63■■□□□ 1.69
PDS5AQ29RF7 OAS3-207ENST00000551007 998 ntTSL 2 BASIC25.63■■□□□ 1.69
Retrieved 100 of 98,524 protein–RNA pairs in 20 ms