Protein–RNA interactions for Protein: Q05919

VPS38, Vacuolar protein sorting-associated protein 38, yeastyeast

Predictions only

Length 439 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VPS38Q05919 VMA7YGR020C 357 nt3.64□□□□□ -1.83
VPS38Q05919 PTI1YGR156W 1278 nt3.64□□□□□ -1.83
VPS38Q05919 ECM13YBL043W 774 nt3.64□□□□□ -1.83
VPS38Q05919 RFC3YNL290W 1023 nt3.64□□□□□ -1.83
VPS38Q05919 YPL162CYPL162C 822 nt3.64□□□□□ -1.83
VPS38Q05919 PBP2YBR233W 1242 nt3.64□□□□□ -1.83
VPS38Q05919 MSM1YGR171C 1728 nt3.64□□□□□ -1.83
VPS38Q05919 SPT14YPL175W 1359 nt3.63□□□□□ -1.83
VPS38Q05919 HUL5YGL141W 2733 nt3.63□□□□□ -1.83
VPS38Q05919 YDL162CYDL162C 357 nt3.63□□□□□ -1.83
VPS38Q05919 APA2YDR530C 978 nt3.63□□□□□ -1.83
VPS38Q05919 OTU1YFL044C 906 nt3.63□□□□□ -1.83
VPS38Q05919 MRPL20YKR085C 588 nt3.63□□□□□ -1.83
VPS38Q05919 YNL320WYNL320W 855 nt3.63□□□□□ -1.83
VPS38Q05919 IPP1YBR011C 864 nt3.63□□□□□ -1.83
VPS38Q05919 SPT16YGL207W 3108 nt3.63□□□□□ -1.83
VPS38Q05919 SPH1YLR313C 1593 nt3.63□□□□□ -1.83
VPS38Q05919 VTC4YJL012C 2166 nt3.62□□□□□ -1.83
VPS38Q05919 RPL30YGL030W 318 nt3.62□□□□□ -1.83
VPS38Q05919 YGL041W-AYGL041W-A 465 nt3.62□□□□□ -1.83
VPS38Q05919 YGL230CYGL230C 444 nt3.62□□□□□ -1.83
VPS38Q05919 YGR114CYGR114C 390 nt3.62□□□□□ -1.83
VPS38Q05919 DOG1YHR044C 741 nt3.62□□□□□ -1.83
VPS38Q05919 RPL22AYLR061W 366 nt3.62□□□□□ -1.83
VPS38Q05919 REH1YLR387C 1299 nt3.62□□□□□ -1.83
VPS38Q05919 GRX7YBR014C 612 nt3.62□□□□□ -1.83
VPS38Q05919 RNR1YER070W 2667 nt3.61□□□□□ -1.83
VPS38Q05919 RRP5YMR229C 5190 nt3.61□□□□□ -1.83
VPS38Q05919 SYT1YPR095C 3681 nt3.61□□□□□ -1.83
VPS38Q05919 YML096WYML096W 1578 nt3.61□□□□□ -1.83
VPS38Q05919 DET1YDR051C 1005 nt3.61□□□□□ -1.83
VPS38Q05919 CBS2YDR197W 1170 nt3.61□□□□□ -1.83
VPS38Q05919 TAM41YGR046W 1158 nt3.61□□□□□ -1.83
VPS38Q05919 YJR111CYJR111C 852 nt3.61□□□□□ -1.83
VPS38Q05919 HMX1YLR205C 954 nt3.61□□□□□ -1.83
VPS38Q05919 DLT1YMR126C 1029 nt3.61□□□□□ -1.83
VPS38Q05919 YPR027CYPR027C 834 nt3.61□□□□□ -1.83
VPS38Q05919 SCD6YPR129W 1050 nt3.61□□□□□ -1.83
VPS38Q05919 YCR099CYCR099C 468 nt3.6□□□□□ -1.83
VPS38Q05919 SPT3YDR392W 1014 nt3.6□□□□□ -1.83
VPS38Q05919 LRS4YDR439W 1044 nt3.6□□□□□ -1.83
VPS38Q05919 RSM27YGR215W 333 nt3.6□□□□□ -1.83
VPS38Q05919 SGN1YIR001C 753 nt3.6□□□□□ -1.83
VPS38Q05919 SNX4YJL036W 1272 nt3.6□□□□□ -1.83
VPS38Q05919 EMC2YJR088C 879 nt3.6□□□□□ -1.83
VPS38Q05919 CCE1YKL011C 1062 nt3.6□□□□□ -1.83
VPS38Q05919 YKL131WYKL131W 522 nt3.6□□□□□ -1.83
VPS38Q05919 SRT1YMR101C 1032 nt3.6□□□□□ -1.83
VPS38Q05919 GOT1YMR292W 417 nt3.6□□□□□ -1.83
VPS38Q05919 INN1YNL152W 1230 nt3.6□□□□□ -1.83
VPS38Q05919 PEX15YOL044W 1152 nt3.6□□□□□ -1.83
VPS38Q05919 YPL088WYPL088W 1029 nt3.6□□□□□ -1.83
VPS38Q05919 KIN3YAR018C 1308 nt3.6□□□□□ -1.83
VPS38Q05919 ARP4YJL081C 1470 nt3.6□□□□□ -1.83
VPS38Q05919 MIP6YHR015W 1980 nt3.6□□□□□ -1.83
VPS38Q05919 SIZ1YDR409W 2715 nt3.59□□□□□ -1.83
VPS38Q05919 AEP2YMR282C 1743 nt3.59□□□□□ -1.83
VPS38Q05919 REB1YBR049C 2433 nt3.59□□□□□ -1.83
VPS38Q05919 ERJ5YFR041C 888 nt3.59□□□□□ -1.83
VPS38Q05919 YGL242CYGL242C 546 nt3.59□□□□□ -1.83
VPS38Q05919 YAL016C-BYAL016C-B 186 nt3.59□□□□□ -1.83
VPS38Q05919 SWD2YKL018W 990 nt3.59□□□□□ -1.83
VPS38Q05919 ECM4YKR076W 1113 nt3.59□□□□□ -1.83
VPS38Q05919 SFH1YLR321C 1281 nt3.59□□□□□ -1.83
VPS38Q05919 RAS1YOR101W 930 nt3.59□□□□□ -1.83
VPS38Q05919 YOR366WYOR366W 354 nt3.59□□□□□ -1.83
VPS38Q05919 RIB5YBR256C 717 nt3.59□□□□□ -1.83
VPS38Q05919 GCD2YGR083C 1956 nt3.59□□□□□ -1.83
VPS38Q05919 WHI3YNL197C 1986 nt3.59□□□□□ -1.83
VPS38Q05919 SLM2YNL047C 1971 nt3.58□□□□□ -1.84
VPS38Q05919 REC8YPR007C 2043 nt3.58□□□□□ -1.84
VPS38Q05919 NSP1YJL041W 2472 nt3.58□□□□□ -1.84
VPS38Q05919 PET100YDR079W 336 nt3.58□□□□□ -1.84
VPS38Q05919 RUB1YDR139C 234 nt3.58□□□□□ -1.84
VPS38Q05919 DPP1YDR284C 870 nt3.58□□□□□ -1.84
VPS38Q05919 SVP26YHR181W 687 nt3.58□□□□□ -1.84
VPS38Q05919 PKP2YGL059W 1476 nt3.58□□□□□ -1.84
VPS38Q05919 YLR177WYLR177W 1887 nt3.58□□□□□ -1.84
VPS38Q05919 YDL176WYDL176W 2127 nt3.58□□□□□ -1.84
VPS38Q05919 GLC3YEL011W 2115 nt3.58□□□□□ -1.84
VPS38Q05919 GCN1YGL195W 8019 nt3.57□□□□□ -1.84
VPS38Q05919 AI4Q0065 1671 nt3.57□□□□□ -1.84
VPS38Q05919 EBS1YDR206W 2655 nt3.57□□□□□ -1.84
VPS38Q05919 ECM11YDR446W 909 nt3.57□□□□□ -1.84
VPS38Q05919 MPS2YGL075C 1164 nt3.57□□□□□ -1.84
VPS38Q05919 OST5YGL226C-A 261 nt3.57□□□□□ -1.84
VPS38Q05919 PMT6YGR199W 2280 nt3.57□□□□□ -1.84
VPS38Q05919 COX6YHR051W 447 nt3.57□□□□□ -1.84
VPS38Q05919 SUC2YIL162W 1599 nt3.57□□□□□ -1.84
VPS38Q05919 CDC5YMR001C 2118 nt3.57□□□□□ -1.84
VPS38Q05919 DIM1YPL266W 957 nt3.57□□□□□ -1.84
VPS38Q05919 SEC27YGL137W 2670 nt3.57□□□□□ -1.84
VPS38Q05919 CAF130YGR134W 3369 nt3.56□□□□□ -1.84
VPS38Q05919 SLY41YOR307C 1362 nt3.56□□□□□ -1.84
VPS38Q05919 ATP16YDL004W 483 nt3.56□□□□□ -1.84
VPS38Q05919 RRP42YDL111C 798 nt3.56□□□□□ -1.84
VPS38Q05919 YDR491CYDR491C 492 nt3.56□□□□□ -1.84
VPS38Q05919 YGR283CYGR283C 1026 nt3.56□□□□□ -1.84
VPS38Q05919 PBA1YLR199C 831 nt3.56□□□□□ -1.84
VPS38Q05919 PPT2YPL148C 522 nt3.56□□□□□ -1.84
Retrieved 100 of 7,029 protein–RNA pairs in 1154.2 ms