Protein–RNA interactions for Protein: Q04673

SSL1, General transcription and DNA repair factor IIH subunit SSL1, yeastyeast

Predicted RBP Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SSL1Q04673 YER190C-BYER190C-B 483 nt4.39□□□□□ -1.71
SSL1Q04673 YFL068WYFL068W 483 nt4.39□□□□□ -1.71
SSL1Q04673 YGR296C-BYGR296C-B 483 nt4.39□□□□□ -1.71
SSL1Q04673 YHL050W-AYHL050W-A 483 nt4.39□□□□□ -1.71
SSL1Q04673 YHR219C-AYHR219C-A 483 nt4.39□□□□□ -1.71
SSL1Q04673 YIL029CYIL029C 429 nt4.39□□□□□ -1.71
SSL1Q04673 YIL177W-AYIL177W-A 483 nt4.39□□□□□ -1.71
SSL1Q04673 YJL225W-AYJL225W-A 483 nt4.39□□□□□ -1.71
SSL1Q04673 YAL047W-AYAL047W-A 330 nt4.39□□□□□ -1.71
SSL1Q04673 YLL066W-AYLL066W-A 483 nt4.39□□□□□ -1.71
SSL1Q04673 YLL067W-AYLL067W-A 483 nt4.39□□□□□ -1.71
SSL1Q04673 YLR466C-AYLR466C-A 483 nt4.39□□□□□ -1.71
SSL1Q04673 YLR467C-AYLR467C-A 483 nt4.39□□□□□ -1.71
SSL1Q04673 GLO1YML004C 981 nt4.39□□□□□ -1.71
SSL1Q04673 YML133W-BYML133W-B 483 nt4.39□□□□□ -1.71
SSL1Q04673 MRPL44YMR225C 297 nt4.39□□□□□ -1.71
SSL1Q04673 YNL181WYNL181W 1224 nt4.39□□□□□ -1.71
SSL1Q04673 YNL339W-BYNL339W-B 483 nt4.39□□□□□ -1.71
SSL1Q04673 YBL113W-AYBL113W-A 483 nt4.39□□□□□ -1.71
SSL1Q04673 YOR396C-AYOR396C-A 483 nt4.39□□□□□ -1.71
SSL1Q04673 YPL283W-BYPL283W-B 483 nt4.39□□□□□ -1.71
SSL1Q04673 YPR204C-AYPR204C-A 483 nt4.39□□□□□ -1.71
SSL1Q04673 YCL022CYCL022C 516 nt4.39□□□□□ -1.71
SSL1Q04673 THR4YCR053W 1545 nt4.39□□□□□ -1.71
SSL1Q04673 SMP3YOR149C 1551 nt4.39□□□□□ -1.71
SSL1Q04673 GLC3YEL011W 2115 nt4.39□□□□□ -1.71
SSL1Q04673 HCM1YCR065W 1695 nt4.38□□□□□ -1.71
SSL1Q04673 AI4Q0065 1671 nt4.38□□□□□ -1.71
SSL1Q04673 SEC27YGL137W 2670 nt4.38□□□□□ -1.71
SSL1Q04673 YDR114CYDR114C 303 nt4.38□□□□□ -1.71
SSL1Q04673 MET32YDR253C 576 nt4.38□□□□□ -1.71
SSL1Q04673 YDR381C-AYDR381C-A 345 nt4.38□□□□□ -1.71
SSL1Q04673 AGA2YGL032C 264 nt4.38□□□□□ -1.71
SSL1Q04673 YGL152CYGL152C 678 nt4.38□□□□□ -1.71
SSL1Q04673 YHL049CYHL049C 816 nt4.38□□□□□ -1.71
SSL1Q04673 YIL165CYIL165C 360 nt4.38□□□□□ -1.71
SSL1Q04673 BNA1YJR025C 534 nt4.38□□□□□ -1.71
SSL1Q04673 TPK3YKL166C 1197 nt4.38□□□□□ -1.71
SSL1Q04673 CDC42YLR229C 576 nt4.38□□□□□ -1.71
SSL1Q04673 YLR400WYLR400W 474 nt4.38□□□□□ -1.71
SSL1Q04673 YPT7YML001W 627 nt4.38□□□□□ -1.71
SSL1Q04673 YCT1YLL055W 1596 nt4.38□□□□□ -1.71
SSL1Q04673 GCN5YGR252W 1320 nt4.38□□□□□ -1.71
SSL1Q04673 RDS2YPL133C 1341 nt4.38□□□□□ -1.71
SSL1Q04673 SLY41YOR307C 1362 nt4.38□□□□□ -1.71
SSL1Q04673 PUT2YHR037W 1728 nt4.38□□□□□ -1.71
SSL1Q04673 CAF4YKR036C 1932 nt4.37□□□□□ -1.71
SSL1Q04673 RIM21YNL294C 1602 nt4.37□□□□□ -1.71
SSL1Q04673 PBP4YDL053C 558 nt4.37□□□□□ -1.71
SSL1Q04673 YEL045CYEL045C 426 nt4.37□□□□□ -1.71
SSL1Q04673 QCR10YHR001W-A 234 nt4.37□□□□□ -1.71
SSL1Q04673 YHR213WYHR213W 597 nt4.37□□□□□ -1.71
SSL1Q04673 ATG10YLL042C 504 nt4.37□□□□□ -1.71
SSL1Q04673 YAR062WYAR062W 597 nt4.37□□□□□ -1.71
SSL1Q04673 YMR001C-AYMR001C-A 231 nt4.37□□□□□ -1.71
SSL1Q04673 UBX4YMR067C 1251 nt4.37□□□□□ -1.71
SSL1Q04673 RBL2YOR265W 321 nt4.37□□□□□ -1.71
SSL1Q04673 RTC1YOL138C 4026 nt4.37□□□□□ -1.71
SSL1Q04673 DUN1YDL101C 1542 nt4.36□□□□□ -1.71
SSL1Q04673 MSM1YGR171C 1728 nt4.36□□□□□ -1.71
SSL1Q04673 YPD1YDL235C 504 nt4.36□□□□□ -1.71
SSL1Q04673 YGR161W-CYGR161W-C 279 nt4.36□□□□□ -1.71
SSL1Q04673 RPL16AYIL133C 600 nt4.36□□□□□ -1.71
SSL1Q04673 MRPL20YKR085C 588 nt4.36□□□□□ -1.71
SSL1Q04673 RGS2YOR107W 930 nt4.36□□□□□ -1.71
SSL1Q04673 ICY2YPL250C 411 nt4.36□□□□□ -1.71
SSL1Q04673 RPB5YBR154C 648 nt4.36□□□□□ -1.71
SSL1Q04673 RTT109YLL002W 1311 nt4.36□□□□□ -1.71
SSL1Q04673 YER158CYER158C 1722 nt4.35□□□□□ -1.71
SSL1Q04673 TRF5YNL299W 1929 nt4.35□□□□□ -1.71
SSL1Q04673 YDL163WYDL163W 303 nt4.35□□□□□ -1.71
SSL1Q04673 tK(CUU)CtK(CUU)C 73 nt4.35□□□□□ -1.71
SSL1Q04673 tK(CUU)D1tK(CUU)D1 73 nt4.35□□□□□ -1.71
SSL1Q04673 tK(CUU)D2tK(CUU)D2 73 nt4.35□□□□□ -1.71
SSL1Q04673 tK(CUU)E1tK(CUU)E1 73 nt4.35□□□□□ -1.71
SSL1Q04673 tK(CUU)E2tK(CUU)E2 73 nt4.35□□□□□ -1.71
SSL1Q04673 tK(CUU)FtK(CUU)F 73 nt4.35□□□□□ -1.71
SSL1Q04673 tK(CUU)G1tK(CUU)G1 73 nt4.35□□□□□ -1.71
SSL1Q04673 tK(CUU)G2tK(CUU)G2 73 nt4.35□□□□□ -1.71
SSL1Q04673 tK(CUU)G3tK(CUU)G3 73 nt4.35□□□□□ -1.71
SSL1Q04673 tK(CUU)ItK(CUU)I 73 nt4.35□□□□□ -1.71
SSL1Q04673 tK(CUU)JtK(CUU)J 73 nt4.35□□□□□ -1.71
SSL1Q04673 tK(CUU)KtK(CUU)K 73 nt4.35□□□□□ -1.71
SSL1Q04673 tK(CUU)MtK(CUU)M 73 nt4.35□□□□□ -1.71
SSL1Q04673 tK(CUU)PtK(CUU)P 73 nt4.35□□□□□ -1.71
SSL1Q04673 tL(UAG)JtL(UAG)J 82 nt4.35□□□□□ -1.71
SSL1Q04673 tL(UAG)L1tL(UAG)L1 82 nt4.35□□□□□ -1.71
SSL1Q04673 tL(UAG)L2tL(UAG)L2 82 nt4.35□□□□□ -1.71
SSL1Q04673 YHR050W-AYHR050W-A 171 nt4.35□□□□□ -1.71
SSL1Q04673 YAP5YIR018W 738 nt4.35□□□□□ -1.71
SSL1Q04673 SNX4YJL036W 1272 nt4.35□□□□□ -1.71
SSL1Q04673 YLR290CYLR290C 834 nt4.35□□□□□ -1.71
SSL1Q04673 YMR052C-AYMR052C-A 366 nt4.35□□□□□ -1.71
SSL1Q04673 YOR379CYOR379C 339 nt4.35□□□□□ -1.71
SSL1Q04673 ALG14YBR070C 714 nt4.35□□□□□ -1.71
SSL1Q04673 YPR170CYPR170C 336 nt4.35□□□□□ -1.71
SSL1Q04673 snR24snR24 89 nt4.35□□□□□ -1.71
SSL1Q04673 OM14YBR230C 405 nt4.35□□□□□ -1.71
SSL1Q04673 KRE2YDR483W 1329 nt4.35□□□□□ -1.71
SSL1Q04673 SEC59YMR013C 1560 nt4.35□□□□□ -1.71
Retrieved 100 of 7,029 protein–RNA pairs in 22.3 ms