Protein–RNA interactions for Protein: Q02985

CFHR3, Complement factor H-related protein 3, humanhuman

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFHR3Q02985 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CFHR3Q02985 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CFHR3Q02985 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CFHR3Q02985 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CFHR3Q02985 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CFHR3Q02985 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CFHR3Q02985 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CFHR3Q02985 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
CFHR3Q02985 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC16.64■□□□□ 0.26
CFHR3Q02985 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CFHR3Q02985 AC003102.1-202ENST00000563394 1796 ntBASIC16.64■□□□□ 0.25
CFHR3Q02985 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CFHR3Q02985 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CFHR3Q02985 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC16.64■□□□□ 0.25
CFHR3Q02985 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
CFHR3Q02985 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CFHR3Q02985 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC16.64■□□□□ 0.25
CFHR3Q02985 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC16.64■□□□□ 0.25
CFHR3Q02985 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC16.64■□□□□ 0.25
CFHR3Q02985 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC16.64■□□□□ 0.25
CFHR3Q02985 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CFHR3Q02985 AC053503.5-201ENST00000601508 636 ntBASIC16.64■□□□□ 0.25
CFHR3Q02985 AC104187.1-201ENST00000607510 612 ntBASIC16.64■□□□□ 0.25
CFHR3Q02985 AC092437.1-201ENST00000624794 1048 ntBASIC16.64■□□□□ 0.25
CFHR3Q02985 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CFHR3Q02985 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC16.64■□□□□ 0.25
CFHR3Q02985 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CFHR3Q02985 LSR-203ENST00000360798 1963 ntTSL 2 BASIC16.64■□□□□ 0.25
CFHR3Q02985 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC16.64■□□□□ 0.25
CFHR3Q02985 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC16.64■□□□□ 0.25
CFHR3Q02985 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CFHR3Q02985 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CFHR3Q02985 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CFHR3Q02985 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
CFHR3Q02985 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
CFHR3Q02985 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
CFHR3Q02985 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CFHR3Q02985 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
CFHR3Q02985 AC026471.6-201ENST00000622954 1905 ntBASIC16.63■□□□□ 0.25
CFHR3Q02985 AL117328.2-201ENST00000624617 1940 ntBASIC16.63■□□□□ 0.25
CFHR3Q02985 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CFHR3Q02985 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
CFHR3Q02985 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CFHR3Q02985 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
CFHR3Q02985 SERP1-208ENST00000491660 830 ntTSL 2 BASIC16.63■□□□□ 0.25
CFHR3Q02985 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC16.63■□□□□ 0.25
CFHR3Q02985 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC16.63■□□□□ 0.25
CFHR3Q02985 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
CFHR3Q02985 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC16.63■□□□□ 0.25
CFHR3Q02985 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
CFHR3Q02985 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
CFHR3Q02985 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CFHR3Q02985 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC16.63■□□□□ 0.25
CFHR3Q02985 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
CFHR3Q02985 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
CFHR3Q02985 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC16.62■□□□□ 0.25
CFHR3Q02985 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CFHR3Q02985 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CFHR3Q02985 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CFHR3Q02985 STX7-201ENST00000367937 1090 ntTSL 5 BASIC16.62■□□□□ 0.25
CFHR3Q02985 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CFHR3Q02985 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CFHR3Q02985 AC006015.1-201ENST00000429970 570 ntBASIC16.62■□□□□ 0.25
CFHR3Q02985 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC16.62■□□□□ 0.25
CFHR3Q02985 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CFHR3Q02985 DBI-210ENST00000542275 757 ntTSL 5 BASIC16.62■□□□□ 0.25
CFHR3Q02985 AC138907.5-202ENST00000569484 235 ntBASIC16.62■□□□□ 0.25
CFHR3Q02985 IKBKGP1-201ENST00000612193 1073 ntBASIC16.62■□□□□ 0.25
CFHR3Q02985 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CFHR3Q02985 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CFHR3Q02985 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
CFHR3Q02985 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CFHR3Q02985 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CFHR3Q02985 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CFHR3Q02985 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
CFHR3Q02985 HSCB-202ENST00000398941 955 ntTSL 2 BASIC16.61■□□□□ 0.25
CFHR3Q02985 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC16.61■□□□□ 0.25
CFHR3Q02985 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC16.61■□□□□ 0.25
CFHR3Q02985 AC010141.2-201ENST00000452426 721 ntBASIC16.61■□□□□ 0.25
CFHR3Q02985 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
CFHR3Q02985 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CFHR3Q02985 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CFHR3Q02985 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CFHR3Q02985 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CFHR3Q02985 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CFHR3Q02985 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC16.6■□□□□ 0.25
CFHR3Q02985 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CFHR3Q02985 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
CFHR3Q02985 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CFHR3Q02985 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CFHR3Q02985 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC16.6■□□□□ 0.25
CFHR3Q02985 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CFHR3Q02985 RNF146-206ENST00000480444 843 ntTSL 2 BASIC16.6■□□□□ 0.25
CFHR3Q02985 AC137761.2-201ENST00000561729 223 ntBASIC16.6■□□□□ 0.25
CFHR3Q02985 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC16.6■□□□□ 0.25
CFHR3Q02985 AC145350.3-201ENST00000569033 163 ntBASIC16.6■□□□□ 0.25
CFHR3Q02985 AP001160.3-201ENST00000601484 763 ntBASIC16.6■□□□□ 0.25
CFHR3Q02985 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC16.6■□□□□ 0.25
CFHR3Q02985 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CFHR3Q02985 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 22.9 ms