Protein–RNA interactions for Protein: Q00526

CDK3, Cyclin-dependent kinase 3, humanhuman

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK3Q00526 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
CDK3Q00526 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CDK3Q00526 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
CDK3Q00526 FAM99A-202ENST00000538190 1989 ntBASIC21■□□□□ 0.95
CDK3Q00526 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CDK3Q00526 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC21■□□□□ 0.95
CDK3Q00526 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC21■□□□□ 0.95
CDK3Q00526 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC21■□□□□ 0.95
CDK3Q00526 AC080038.1-201ENST00000611274 1154 ntBASIC21■□□□□ 0.95
CDK3Q00526 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC21■□□□□ 0.95
CDK3Q00526 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CDK3Q00526 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC21■□□□□ 0.95
CDK3Q00526 AC026471.6-201ENST00000622954 1905 ntBASIC21■□□□□ 0.95
CDK3Q00526 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CDK3Q00526 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CDK3Q00526 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC20.99■□□□□ 0.95
CDK3Q00526 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CDK3Q00526 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CDK3Q00526 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
CDK3Q00526 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC20.99■□□□□ 0.95
CDK3Q00526 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CDK3Q00526 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CDK3Q00526 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CDK3Q00526 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CDK3Q00526 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC20.99■□□□□ 0.95
CDK3Q00526 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC20.99■□□□□ 0.95
CDK3Q00526 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC20.99■□□□□ 0.95
CDK3Q00526 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CDK3Q00526 UBE2DNL-204ENST00000602536 740 ntBASIC20.99■□□□□ 0.95
CDK3Q00526 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC20.99■□□□□ 0.95
CDK3Q00526 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CDK3Q00526 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
CDK3Q00526 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CDK3Q00526 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CDK3Q00526 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
CDK3Q00526 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
CDK3Q00526 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC20.98■□□□□ 0.95
CDK3Q00526 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
CDK3Q00526 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CDK3Q00526 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
CDK3Q00526 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CDK3Q00526 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
CDK3Q00526 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC20.98■□□□□ 0.95
CDK3Q00526 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CDK3Q00526 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CDK3Q00526 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CDK3Q00526 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CDK3Q00526 PARP1-202ENST00000366792 553 ntTSL 3 BASIC20.97■□□□□ 0.95
CDK3Q00526 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
CDK3Q00526 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
CDK3Q00526 RNF146-206ENST00000480444 843 ntTSL 2 BASIC20.97■□□□□ 0.95
CDK3Q00526 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC20.97■□□□□ 0.95
CDK3Q00526 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC20.97■□□□□ 0.95
CDK3Q00526 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC20.97■□□□□ 0.95
CDK3Q00526 AC011767.1-201ENST00000617410 1153 ntBASIC20.97■□□□□ 0.95
CDK3Q00526 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC20.97■□□□□ 0.95
CDK3Q00526 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
CDK3Q00526 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CDK3Q00526 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
CDK3Q00526 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CDK3Q00526 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
CDK3Q00526 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC20.97■□□□□ 0.95
CDK3Q00526 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CDK3Q00526 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CDK3Q00526 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CDK3Q00526 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CDK3Q00526 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
CDK3Q00526 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC20.96■□□□□ 0.95
CDK3Q00526 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC20.96■□□□□ 0.95
CDK3Q00526 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC20.96■□□□□ 0.95
CDK3Q00526 KRT18P20-201ENST00000548986 1279 ntBASIC20.96■□□□□ 0.95
CDK3Q00526 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC20.96■□□□□ 0.95
CDK3Q00526 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC20.96■□□□□ 0.95
CDK3Q00526 MFSD11-216ENST00000590393 1141 ntBASIC20.96■□□□□ 0.95
CDK3Q00526 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CDK3Q00526 TFG-210ENST00000620299 1289 ntTSL 5 BASIC20.96■□□□□ 0.95
CDK3Q00526 AC073111.5-205ENST00000641717 521 ntBASIC20.96■□□□□ 0.95
CDK3Q00526 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC20.96■□□□□ 0.95
CDK3Q00526 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC20.95■□□□□ 0.95
CDK3Q00526 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
CDK3Q00526 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
CDK3Q00526 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
CDK3Q00526 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CDK3Q00526 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CDK3Q00526 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CDK3Q00526 NAA20-201ENST00000310450 920 ntTSL 2 BASIC20.95■□□□□ 0.94
CDK3Q00526 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
CDK3Q00526 CDCA4P2-201ENST00000441182 718 ntBASIC20.95■□□□□ 0.94
CDK3Q00526 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC20.95■□□□□ 0.94
CDK3Q00526 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
CDK3Q00526 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC20.95■□□□□ 0.94
CDK3Q00526 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC20.95■□□□□ 0.94
CDK3Q00526 MYCNOS-205ENST00000641950 531 ntBASIC20.95■□□□□ 0.94
CDK3Q00526 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC20.95■□□□□ 0.94
CDK3Q00526 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CDK3Q00526 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
CDK3Q00526 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
CDK3Q00526 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
CDK3Q00526 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CDK3Q00526 AC010542.4-201ENST00000563151 1910 ntBASIC20.94■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 26 ms