Protein–RNA interactions for Protein: P68431

HIST1H3A, Histone H3.1, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H3AP68431 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC18.61■□□□□ 0.57
HIST1H3AP68431 AC012414.1-201ENST00000556676 535 ntBASIC18.61■□□□□ 0.57
HIST1H3AP68431 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC18.61■□□□□ 0.57
HIST1H3AP68431 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
HIST1H3AP68431 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
HIST1H3AP68431 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
HIST1H3AP68431 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
HIST1H3AP68431 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
HIST1H3AP68431 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC18.6■□□□□ 0.57
HIST1H3AP68431 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC18.6■□□□□ 0.57
HIST1H3AP68431 BX005040.4-201ENST00000637145 1518 ntBASIC18.6■□□□□ 0.57
HIST1H3AP68431 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
HIST1H3AP68431 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC18.6■□□□□ 0.57
HIST1H3AP68431 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
HIST1H3AP68431 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
HIST1H3AP68431 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
HIST1H3AP68431 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
HIST1H3AP68431 AC005837.3-201ENST00000612163 286 ntBASIC18.6■□□□□ 0.57
HIST1H3AP68431 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
HIST1H3AP68431 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
HIST1H3AP68431 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
HIST1H3AP68431 PXK-203ENST00000383715 1756 ntTSL 5 BASIC18.6■□□□□ 0.57
HIST1H3AP68431 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC18.59■□□□□ 0.57
HIST1H3AP68431 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
HIST1H3AP68431 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC18.59■□□□□ 0.57
HIST1H3AP68431 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC18.59■□□□□ 0.57
HIST1H3AP68431 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC18.59■□□□□ 0.57
HIST1H3AP68431 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
HIST1H3AP68431 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
HIST1H3AP68431 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
HIST1H3AP68431 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
HIST1H3AP68431 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
HIST1H3AP68431 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC18.59■□□□□ 0.57
HIST1H3AP68431 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC18.59■□□□□ 0.57
HIST1H3AP68431 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC18.59■□□□□ 0.57
HIST1H3AP68431 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
HIST1H3AP68431 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC18.59■□□□□ 0.57
HIST1H3AP68431 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
HIST1H3AP68431 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
HIST1H3AP68431 AC005224.4-201ENST00000583262 1652 ntBASIC18.59■□□□□ 0.57
HIST1H3AP68431 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC18.59■□□□□ 0.57
HIST1H3AP68431 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC18.59■□□□□ 0.57
HIST1H3AP68431 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC18.59■□□□□ 0.57
HIST1H3AP68431 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
HIST1H3AP68431 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
HIST1H3AP68431 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
HIST1H3AP68431 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC18.58■□□□□ 0.57
HIST1H3AP68431 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
HIST1H3AP68431 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
HIST1H3AP68431 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC18.58■□□□□ 0.56
HIST1H3AP68431 AC142381.2-201ENST00000566120 298 ntBASIC18.58■□□□□ 0.56
HIST1H3AP68431 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC18.58■□□□□ 0.56
HIST1H3AP68431 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC18.58■□□□□ 0.56
HIST1H3AP68431 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
HIST1H3AP68431 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
HIST1H3AP68431 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
HIST1H3AP68431 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
HIST1H3AP68431 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC18.57■□□□□ 0.56
HIST1H3AP68431 MPST-204ENST00000404393 1329 ntTSL 5 BASIC18.57■□□□□ 0.56
HIST1H3AP68431 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
HIST1H3AP68431 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC18.57■□□□□ 0.56
HIST1H3AP68431 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC18.57■□□□□ 0.56
HIST1H3AP68431 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC18.57■□□□□ 0.56
HIST1H3AP68431 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC18.57■□□□□ 0.56
HIST1H3AP68431 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
HIST1H3AP68431 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
HIST1H3AP68431 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC18.57■□□□□ 0.56
HIST1H3AP68431 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
HIST1H3AP68431 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
HIST1H3AP68431 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC18.57■□□□□ 0.56
HIST1H3AP68431 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC18.57■□□□□ 0.56
HIST1H3AP68431 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
HIST1H3AP68431 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC18.56■□□□□ 0.56
HIST1H3AP68431 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
HIST1H3AP68431 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
HIST1H3AP68431 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
HIST1H3AP68431 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
HIST1H3AP68431 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
HIST1H3AP68431 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC18.56■□□□□ 0.56
HIST1H3AP68431 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
HIST1H3AP68431 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
HIST1H3AP68431 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
HIST1H3AP68431 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
HIST1H3AP68431 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC18.56■□□□□ 0.56
HIST1H3AP68431 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
HIST1H3AP68431 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC18.56■□□□□ 0.56
HIST1H3AP68431 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC18.56■□□□□ 0.56
HIST1H3AP68431 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
HIST1H3AP68431 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
HIST1H3AP68431 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC18.56■□□□□ 0.56
HIST1H3AP68431 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC18.56■□□□□ 0.56
HIST1H3AP68431 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
HIST1H3AP68431 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
HIST1H3AP68431 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
HIST1H3AP68431 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
HIST1H3AP68431 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC18.55■□□□□ 0.56
HIST1H3AP68431 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
HIST1H3AP68431 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
HIST1H3AP68431 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC18.55■□□□□ 0.56
HIST1H3AP68431 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 17.1 ms