Protein–RNA interactions for Protein: P61073

CXCR4, C-X-C chemokine receptor type 4, humanhuman

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4P61073 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC19.38■□□□□ 0.69
CXCR4P61073 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CXCR4P61073 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC19.37■□□□□ 0.69
CXCR4P61073 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC19.37■□□□□ 0.69
CXCR4P61073 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
CXCR4P61073 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC19.37■□□□□ 0.69
CXCR4P61073 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CXCR4P61073 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CXCR4P61073 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
CXCR4P61073 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC19.37■□□□□ 0.69
CXCR4P61073 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CXCR4P61073 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CXCR4P61073 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CXCR4P61073 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
CXCR4P61073 AC009102.2-201ENST00000606772 1639 ntBASIC19.36■□□□□ 0.69
CXCR4P61073 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC19.36■□□□□ 0.69
CXCR4P61073 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC19.36■□□□□ 0.69
CXCR4P61073 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
CXCR4P61073 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CXCR4P61073 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
CXCR4P61073 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CXCR4P61073 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC19.36■□□□□ 0.69
CXCR4P61073 PRTG-204ENST00000561292 833 ntTSL 3 BASIC19.36■□□□□ 0.69
CXCR4P61073 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
CXCR4P61073 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC19.36■□□□□ 0.69
CXCR4P61073 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CXCR4P61073 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
CXCR4P61073 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
CXCR4P61073 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CXCR4P61073 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC19.35■□□□□ 0.69
CXCR4P61073 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
CXCR4P61073 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CXCR4P61073 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC19.35■□□□□ 0.69
CXCR4P61073 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC19.35■□□□□ 0.69
CXCR4P61073 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC19.35■□□□□ 0.69
CXCR4P61073 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC19.35■□□□□ 0.69
CXCR4P61073 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CXCR4P61073 AC092028.1-203ENST00000608262 953 ntBASIC19.35■□□□□ 0.69
CXCR4P61073 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CXCR4P61073 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC19.35■□□□□ 0.69
CXCR4P61073 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
CXCR4P61073 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CXCR4P61073 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CXCR4P61073 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
CXCR4P61073 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CXCR4P61073 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CXCR4P61073 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CXCR4P61073 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
CXCR4P61073 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
CXCR4P61073 ME2-216ENST00000639850 2331 ntTSL 5 BASIC19.34■□□□□ 0.69
CXCR4P61073 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC19.34■□□□□ 0.69
CXCR4P61073 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC19.34■□□□□ 0.69
CXCR4P61073 RNF146-205ENST00000477776 762 ntTSL 3 BASIC19.34■□□□□ 0.69
CXCR4P61073 AC079089.2-201ENST00000531211 1277 ntBASIC19.34■□□□□ 0.69
CXCR4P61073 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC19.34■□□□□ 0.69
CXCR4P61073 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC19.34■□□□□ 0.69
CXCR4P61073 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
CXCR4P61073 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CXCR4P61073 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CXCR4P61073 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC19.34■□□□□ 0.69
CXCR4P61073 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC19.34■□□□□ 0.69
CXCR4P61073 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CXCR4P61073 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
CXCR4P61073 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
CXCR4P61073 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.69
CXCR4P61073 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC19.33■□□□□ 0.69
CXCR4P61073 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC19.33■□□□□ 0.68
CXCR4P61073 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CXCR4P61073 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC19.33■□□□□ 0.68
CXCR4P61073 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC19.33■□□□□ 0.68
CXCR4P61073 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CXCR4P61073 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CXCR4P61073 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CXCR4P61073 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CXCR4P61073 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC19.33■□□□□ 0.68
CXCR4P61073 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
CXCR4P61073 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CXCR4P61073 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CXCR4P61073 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CXCR4P61073 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC19.32■□□□□ 0.68
CXCR4P61073 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CXCR4P61073 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC19.32■□□□□ 0.68
CXCR4P61073 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC19.32■□□□□ 0.68
CXCR4P61073 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
CXCR4P61073 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
CXCR4P61073 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC19.32■□□□□ 0.68
CXCR4P61073 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CXCR4P61073 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
CXCR4P61073 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
CXCR4P61073 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CXCR4P61073 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC19.32■□□□□ 0.68
CXCR4P61073 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
CXCR4P61073 KRT125P-201ENST00000546827 989 ntBASIC19.32■□□□□ 0.68
CXCR4P61073 MTDHP2-201ENST00000601468 714 ntBASIC19.32■□□□□ 0.68
CXCR4P61073 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CXCR4P61073 USP45-205ENST00000472914 1617 ntTSL 5 BASIC19.32■□□□□ 0.68
CXCR4P61073 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC19.32■□□□□ 0.68
CXCR4P61073 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CXCR4P61073 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CXCR4P61073 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 17.8 ms