Protein–RNA interactions for Protein: P54709

ATP1B3, Sodium/potassium-transporting ATPase subunit beta-3, humanhuman

Predictions only

Length 279 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP1B3P54709 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
ATP1B3P54709 AC092667.1-201ENST00000434301 2586 ntBASIC18.39■□□□□ 0.54
ATP1B3P54709 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
ATP1B3P54709 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
ATP1B3P54709 OXCT2P1-201ENST00000447263 1535 ntBASIC18.39■□□□□ 0.54
ATP1B3P54709 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
ATP1B3P54709 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC18.39■□□□□ 0.53
ATP1B3P54709 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC18.39■□□□□ 0.53
ATP1B3P54709 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
ATP1B3P54709 AC104564.3-201ENST00000582367 638 ntBASIC18.39■□□□□ 0.53
ATP1B3P54709 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
ATP1B3P54709 AC136469.2-201ENST00000623944 1028 ntBASIC18.39■□□□□ 0.53
ATP1B3P54709 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
ATP1B3P54709 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
ATP1B3P54709 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
ATP1B3P54709 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
ATP1B3P54709 TUB-203ENST00000534099 1759 ntTSL 2 BASIC18.39■□□□□ 0.53
ATP1B3P54709 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
ATP1B3P54709 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
ATP1B3P54709 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
ATP1B3P54709 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC18.39■□□□□ 0.53
ATP1B3P54709 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
ATP1B3P54709 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
ATP1B3P54709 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
ATP1B3P54709 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
ATP1B3P54709 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
ATP1B3P54709 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
ATP1B3P54709 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
ATP1B3P54709 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC18.38■□□□□ 0.53
ATP1B3P54709 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
ATP1B3P54709 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC18.38■□□□□ 0.53
ATP1B3P54709 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC18.38■□□□□ 0.53
ATP1B3P54709 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC18.38■□□□□ 0.53
ATP1B3P54709 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
ATP1B3P54709 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
ATP1B3P54709 AC005229.4-201ENST00000610085 2198 ntBASIC18.38■□□□□ 0.53
ATP1B3P54709 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
ATP1B3P54709 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC18.38■□□□□ 0.53
ATP1B3P54709 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC18.38■□□□□ 0.53
ATP1B3P54709 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
ATP1B3P54709 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
ATP1B3P54709 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC18.37■□□□□ 0.53
ATP1B3P54709 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC18.37■□□□□ 0.53
ATP1B3P54709 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
ATP1B3P54709 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
ATP1B3P54709 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
ATP1B3P54709 AC131281.2-201ENST00000520478 145 ntBASIC18.37■□□□□ 0.53
ATP1B3P54709 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC18.37■□□□□ 0.53
ATP1B3P54709 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
ATP1B3P54709 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC18.37■□□□□ 0.53
ATP1B3P54709 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
ATP1B3P54709 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
ATP1B3P54709 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
ATP1B3P54709 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
ATP1B3P54709 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
ATP1B3P54709 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
ATP1B3P54709 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
ATP1B3P54709 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
ATP1B3P54709 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
ATP1B3P54709 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
ATP1B3P54709 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC18.36■□□□□ 0.53
ATP1B3P54709 AP005435.1-201ENST00000529293 1178 ntBASIC18.36■□□□□ 0.53
ATP1B3P54709 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC18.36■□□□□ 0.53
ATP1B3P54709 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC18.36■□□□□ 0.53
ATP1B3P54709 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC18.36■□□□□ 0.53
ATP1B3P54709 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC18.36■□□□□ 0.53
ATP1B3P54709 AL034346.1-201ENST00000568244 1277 ntBASIC18.36■□□□□ 0.53
ATP1B3P54709 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
ATP1B3P54709 ME2-206ENST00000638410 2289 ntTSL 5 BASIC18.36■□□□□ 0.53
ATP1B3P54709 ME2-210ENST00000639255 2262 ntTSL 5 BASIC18.36■□□□□ 0.53
ATP1B3P54709 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC18.36■□□□□ 0.53
ATP1B3P54709 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC18.36■□□□□ 0.53
ATP1B3P54709 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC18.35■□□□□ 0.53
ATP1B3P54709 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
ATP1B3P54709 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
ATP1B3P54709 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
ATP1B3P54709 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC18.35■□□□□ 0.53
ATP1B3P54709 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
ATP1B3P54709 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC18.35■□□□□ 0.53
ATP1B3P54709 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
ATP1B3P54709 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC18.35■□□□□ 0.53
ATP1B3P54709 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC18.35■□□□□ 0.53
ATP1B3P54709 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
ATP1B3P54709 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
ATP1B3P54709 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
ATP1B3P54709 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
ATP1B3P54709 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC18.34■□□□□ 0.53
ATP1B3P54709 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
ATP1B3P54709 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC18.34■□□□□ 0.53
ATP1B3P54709 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
ATP1B3P54709 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
ATP1B3P54709 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
ATP1B3P54709 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
ATP1B3P54709 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
ATP1B3P54709 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC18.34■□□□□ 0.53
ATP1B3P54709 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
ATP1B3P54709 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
ATP1B3P54709 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
ATP1B3P54709 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
ATP1B3P54709 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 16.7 ms