Protein–RNA interactions for Protein: P51800

CLCNKA, Chloride channel protein ClC-Ka, humanhuman

Predictions only

Length 687 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKAP51800 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
CLCNKAP51800 AC104187.1-201ENST00000607510 612 ntBASIC20.88■□□□□ 0.93
CLCNKAP51800 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
CLCNKAP51800 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
CLCNKAP51800 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC20.87■□□□□ 0.93
CLCNKAP51800 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CLCNKAP51800 GAS2L1P2-201ENST00000436355 1356 ntBASIC20.87■□□□□ 0.93
CLCNKAP51800 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
CLCNKAP51800 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
CLCNKAP51800 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CLCNKAP51800 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
CLCNKAP51800 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CLCNKAP51800 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
CLCNKAP51800 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CLCNKAP51800 KRT18P11-201ENST00000435214 1283 ntBASIC20.87■□□□□ 0.93
CLCNKAP51800 EEF1DP3-203ENST00000566025 782 ntBASIC20.87■□□□□ 0.93
CLCNKAP51800 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC20.87■□□□□ 0.93
CLCNKAP51800 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC20.87■□□□□ 0.93
CLCNKAP51800 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CLCNKAP51800 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
CLCNKAP51800 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC20.87■□□□□ 0.93
CLCNKAP51800 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
CLCNKAP51800 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
CLCNKAP51800 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
CLCNKAP51800 AC138907.5-202ENST00000569484 235 ntBASIC20.86■□□□□ 0.93
CLCNKAP51800 AC053503.5-201ENST00000601508 636 ntBASIC20.86■□□□□ 0.93
CLCNKAP51800 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC20.86■□□□□ 0.93
CLCNKAP51800 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
CLCNKAP51800 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
CLCNKAP51800 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CLCNKAP51800 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC20.86■□□□□ 0.93
CLCNKAP51800 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
CLCNKAP51800 CLDN5-201ENST00000403084 2357 ntBASIC20.86■□□□□ 0.93
CLCNKAP51800 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
CLCNKAP51800 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
CLCNKAP51800 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
CLCNKAP51800 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CLCNKAP51800 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CLCNKAP51800 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CLCNKAP51800 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
CLCNKAP51800 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
CLCNKAP51800 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CLCNKAP51800 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
CLCNKAP51800 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
CLCNKAP51800 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
CLCNKAP51800 AC016769.1-201ENST00000409132 1010 ntBASIC20.85■□□□□ 0.93
CLCNKAP51800 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
CLCNKAP51800 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC20.85■□□□□ 0.93
CLCNKAP51800 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC20.85■□□□□ 0.93
CLCNKAP51800 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC20.85■□□□□ 0.93
CLCNKAP51800 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
CLCNKAP51800 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
CLCNKAP51800 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC20.84■□□□□ 0.93
CLCNKAP51800 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CLCNKAP51800 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CLCNKAP51800 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CLCNKAP51800 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
CLCNKAP51800 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
CLCNKAP51800 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CLCNKAP51800 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
CLCNKAP51800 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CLCNKAP51800 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
CLCNKAP51800 AC004911.1-201ENST00000416316 871 ntBASIC20.84■□□□□ 0.93
CLCNKAP51800 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC20.84■□□□□ 0.93
CLCNKAP51800 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CLCNKAP51800 SERP1-208ENST00000491660 830 ntTSL 2 BASIC20.84■□□□□ 0.93
CLCNKAP51800 WWOX-218ENST00000627394 894 ntTSL 5 BASIC20.84■□□□□ 0.93
CLCNKAP51800 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CLCNKAP51800 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
CLCNKAP51800 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC20.84■□□□□ 0.93
CLCNKAP51800 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
CLCNKAP51800 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CLCNKAP51800 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CLCNKAP51800 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
CLCNKAP51800 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
CLCNKAP51800 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC20.83■□□□□ 0.93
CLCNKAP51800 FAM99A-202ENST00000538190 1989 ntBASIC20.83■□□□□ 0.93
CLCNKAP51800 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
CLCNKAP51800 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
CLCNKAP51800 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
CLCNKAP51800 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
CLCNKAP51800 AC010141.2-201ENST00000452426 721 ntBASIC20.83■□□□□ 0.93
CLCNKAP51800 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC20.83■□□□□ 0.93
CLCNKAP51800 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC20.83■□□□□ 0.93
CLCNKAP51800 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC20.83■□□□□ 0.93
CLCNKAP51800 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
CLCNKAP51800 VPS53-216ENST00000574029 585 ntTSL 4 BASIC20.83■□□□□ 0.93
CLCNKAP51800 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
CLCNKAP51800 AP001160.3-201ENST00000601484 763 ntBASIC20.83■□□□□ 0.93
CLCNKAP51800 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.93
CLCNKAP51800 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
CLCNKAP51800 ECEL1P1-201ENST00000373592 1742 ntBASIC20.83■□□□□ 0.92
CLCNKAP51800 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC20.83■□□□□ 0.92
CLCNKAP51800 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
CLCNKAP51800 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
CLCNKAP51800 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC20.82■□□□□ 0.92
CLCNKAP51800 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC20.82■□□□□ 0.92
CLCNKAP51800 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CLCNKAP51800 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
CLCNKAP51800 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms