Protein–RNA interactions for Protein: P49427

CDC34, Ubiquitin-conjugating enzyme E2 R1, humanhuman

Predicted RBP Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC34P49427 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CDC34P49427 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
CDC34P49427 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CDC34P49427 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CDC34P49427 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CDC34P49427 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CDC34P49427 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
CDC34P49427 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC16.75■□□□□ 0.27
CDC34P49427 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CDC34P49427 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
CDC34P49427 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CDC34P49427 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
CDC34P49427 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC16.75■□□□□ 0.27
CDC34P49427 IDNK-201ENST00000376417 511 ntTSL 5 BASIC16.75■□□□□ 0.27
CDC34P49427 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CDC34P49427 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CDC34P49427 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC16.75■□□□□ 0.27
CDC34P49427 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
CDC34P49427 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CDC34P49427 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CDC34P49427 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
CDC34P49427 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CDC34P49427 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CDC34P49427 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CDC34P49427 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CDC34P49427 AC007952.6-201ENST00000573168 2673 ntBASIC16.74■□□□□ 0.27
CDC34P49427 AC003957.1-201ENST00000625108 2673 ntBASIC16.74■□□□□ 0.27
CDC34P49427 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CDC34P49427 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
CDC34P49427 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
CDC34P49427 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC16.74■□□□□ 0.27
CDC34P49427 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC16.74■□□□□ 0.27
CDC34P49427 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CDC34P49427 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
CDC34P49427 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
CDC34P49427 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CDC34P49427 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
CDC34P49427 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CDC34P49427 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
CDC34P49427 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC16.74■□□□□ 0.27
CDC34P49427 ABHD17AP3-201ENST00000503096 1137 ntBASIC16.74■□□□□ 0.27
CDC34P49427 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CDC34P49427 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC16.74■□□□□ 0.27
CDC34P49427 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
CDC34P49427 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC16.74■□□□□ 0.27
CDC34P49427 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC16.74■□□□□ 0.27
CDC34P49427 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC16.74■□□□□ 0.27
CDC34P49427 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CDC34P49427 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC16.74■□□□□ 0.27
CDC34P49427 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
CDC34P49427 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CDC34P49427 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CDC34P49427 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CDC34P49427 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC16.73■□□□□ 0.27
CDC34P49427 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CDC34P49427 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CDC34P49427 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CDC34P49427 ADM-207ENST00000530439 1839 ntTSL 2 BASIC16.73■□□□□ 0.27
CDC34P49427 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
CDC34P49427 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
CDC34P49427 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CDC34P49427 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC16.73■□□□□ 0.27
CDC34P49427 KRT18P60-201ENST00000312876 1297 ntBASIC16.73■□□□□ 0.27
CDC34P49427 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC16.73■□□□□ 0.27
CDC34P49427 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC16.73■□□□□ 0.27
CDC34P49427 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CDC34P49427 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CDC34P49427 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CDC34P49427 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CDC34P49427 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC16.73■□□□□ 0.27
CDC34P49427 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC16.73■□□□□ 0.27
CDC34P49427 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC16.73■□□□□ 0.27
CDC34P49427 AC026471.6-201ENST00000622954 1905 ntBASIC16.72■□□□□ 0.27
CDC34P49427 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC16.72■□□□□ 0.27
CDC34P49427 C17orf82-201ENST00000623772 1530 ntBASIC16.72■□□□□ 0.27
CDC34P49427 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CDC34P49427 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CDC34P49427 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CDC34P49427 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC16.72■□□□□ 0.27
CDC34P49427 BHLHE23-202ENST00000612929 1109 ntBASIC16.72■□□□□ 0.27
CDC34P49427 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC16.72■□□□□ 0.27
CDC34P49427 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
CDC34P49427 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC16.72■□□□□ 0.27
CDC34P49427 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC16.72■□□□□ 0.27
CDC34P49427 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
CDC34P49427 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CDC34P49427 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CDC34P49427 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CDC34P49427 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CDC34P49427 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CDC34P49427 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CDC34P49427 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC16.72■□□□□ 0.27
CDC34P49427 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CDC34P49427 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CDC34P49427 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC16.71■□□□□ 0.27
CDC34P49427 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CDC34P49427 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CDC34P49427 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC16.71■□□□□ 0.27
CDC34P49427 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CDC34P49427 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 25 ms