Protein–RNA interactions for Protein: P48443

RXRG, Retinoic acid receptor RXR-gamma, humanhuman

Predictions only

Length 463 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RXRGP48443 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
RXRGP48443 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
RXRGP48443 MIR663A-201ENST00000385250 93 ntBASIC21.21■□□□□ 0.99
RXRGP48443 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
RXRGP48443 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC21.21■□□□□ 0.99
RXRGP48443 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
RXRGP48443 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
RXRGP48443 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
RXRGP48443 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC21.21■□□□□ 0.99
RXRGP48443 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.98
RXRGP48443 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC21.2■□□□□ 0.98
RXRGP48443 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
RXRGP48443 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
RXRGP48443 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC21.2■□□□□ 0.98
RXRGP48443 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
RXRGP48443 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
RXRGP48443 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
RXRGP48443 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC21.2■□□□□ 0.98
RXRGP48443 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC21.2■□□□□ 0.98
RXRGP48443 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
RXRGP48443 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC21.2■□□□□ 0.98
RXRGP48443 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
RXRGP48443 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.98
RXRGP48443 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC21.2■□□□□ 0.98
RXRGP48443 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC21.2■□□□□ 0.98
RXRGP48443 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
RXRGP48443 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
RXRGP48443 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
RXRGP48443 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
RXRGP48443 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
RXRGP48443 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
RXRGP48443 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
RXRGP48443 AL355802.2-201ENST00000402069 882 ntBASIC21.19■□□□□ 0.98
RXRGP48443 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC21.19■□□□□ 0.98
RXRGP48443 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC21.19■□□□□ 0.98
RXRGP48443 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC21.19■□□□□ 0.98
RXRGP48443 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC21.19■□□□□ 0.98
RXRGP48443 AC231657.2-201ENST00000624556 255 ntBASIC21.19■□□□□ 0.98
RXRGP48443 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
RXRGP48443 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
RXRGP48443 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
RXRGP48443 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
RXRGP48443 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
RXRGP48443 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
RXRGP48443 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
RXRGP48443 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
RXRGP48443 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC21.18■□□□□ 0.98
RXRGP48443 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC21.18■□□□□ 0.98
RXRGP48443 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC21.18■□□□□ 0.98
RXRGP48443 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
RXRGP48443 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
RXRGP48443 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC21.18■□□□□ 0.98
RXRGP48443 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
RXRGP48443 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC21.18■□□□□ 0.98
RXRGP48443 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC21.18■□□□□ 0.98
RXRGP48443 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
RXRGP48443 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC21.17■□□□□ 0.98
RXRGP48443 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC21.17■□□□□ 0.98
RXRGP48443 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
RXRGP48443 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
RXRGP48443 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
RXRGP48443 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC21.17■□□□□ 0.98
RXRGP48443 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
RXRGP48443 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC21.17■□□□□ 0.98
RXRGP48443 DUX4L16-201ENST00000555130 1264 ntBASIC21.17■□□□□ 0.98
RXRGP48443 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC21.17■□□□□ 0.98
RXRGP48443 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC21.17■□□□□ 0.98
RXRGP48443 WT1-AS_3.1-201ENST00000613262 234 ntBASIC21.17■□□□□ 0.98
RXRGP48443 TFG-210ENST00000620299 1289 ntTSL 5 BASIC21.17■□□□□ 0.98
RXRGP48443 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC21.17■□□□□ 0.98
RXRGP48443 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC21.17■□□□□ 0.98
RXRGP48443 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
RXRGP48443 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
RXRGP48443 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
RXRGP48443 MFF-207ENST00000409565 1548 ntTSL 2 BASIC21.16■□□□□ 0.98
RXRGP48443 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC21.16■□□□□ 0.98
RXRGP48443 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC21.16■□□□□ 0.98
RXRGP48443 AC055733.4-201ENST00000638462 1354 ntBASIC21.16■□□□□ 0.98
RXRGP48443 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
RXRGP48443 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
RXRGP48443 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
RXRGP48443 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
RXRGP48443 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
RXRGP48443 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
RXRGP48443 AL121832.2-201ENST00000610979 668 ntBASIC21.16■□□□□ 0.98
RXRGP48443 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
RXRGP48443 PKD1P6-201ENST00000343738 4769 ntBASIC21.16■□□□□ 0.98
RXRGP48443 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
RXRGP48443 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC21.16■□□□□ 0.98
RXRGP48443 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
RXRGP48443 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC21.15■□□□□ 0.98
RXRGP48443 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
RXRGP48443 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
RXRGP48443 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
RXRGP48443 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
RXRGP48443 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
RXRGP48443 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
RXRGP48443 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
RXRGP48443 AC079089.2-201ENST00000531211 1277 ntBASIC21.15■□□□□ 0.98
RXRGP48443 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC21.15■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms