Protein–RNA interactions for Protein: P47061

VPS53, Vacuolar protein sorting-associated protein 53, yeastyeast

Predictions only

Length 822 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VPS53P47061 RAD28YDR030C 1521 nt4.86□□□□□ -1.63
VPS53P47061 UBX5YDR330W 1503 nt4.86□□□□□ -1.63
VPS53P47061 MTL1YGR023W 1656 nt4.86□□□□□ -1.63
VPS53P47061 EGT2YNL327W 3126 nt4.85□□□□□ -1.63
VPS53P47061 DPB4YDR121W 591 nt4.85□□□□□ -1.63
VPS53P47061 LPP1YDR503C 825 nt4.85□□□□□ -1.63
VPS53P47061 RNP1YLL046C 750 nt4.85□□□□□ -1.63
VPS53P47061 SWS2YNL081C 432 nt4.85□□□□□ -1.63
VPS53P47061 YNL235CYNL235C 432 nt4.85□□□□□ -1.63
VPS53P47061 YRO2YBR054W 1035 nt4.85□□□□□ -1.63
VPS53P47061 HOM3YER052C 1584 nt4.85□□□□□ -1.63
VPS53P47061 SUC2YIL162W 1599 nt4.85□□□□□ -1.63
VPS53P47061 MSE1YOL033W 1611 nt4.85□□□□□ -1.63
VPS53P47061 PRP28YDR243C 1767 nt4.84□□□□□ -1.63
VPS53P47061 ERG11YHR007C 1593 nt4.84□□□□□ -1.63
VPS53P47061 YCT1YLL055W 1596 nt4.84□□□□□ -1.63
VPS53P47061 YGL152CYGL152C 678 nt4.84□□□□□ -1.63
VPS53P47061 YAR047CYAR047C 321 nt4.84□□□□□ -1.63
VPS53P47061 YMR052C-AYMR052C-A 366 nt4.84□□□□□ -1.63
VPS53P47061 YOR293C-AYOR293C-A 150 nt4.84□□□□□ -1.63
VPS53P47061 NNK1YKL171W 2787 nt4.84□□□□□ -1.63
VPS53P47061 YND1YER005W 1893 nt4.83□□□□□ -1.64
VPS53P47061 UGA3YDL170W 1587 nt4.83□□□□□ -1.64
VPS53P47061 OLE1YGL055W 1533 nt4.83□□□□□ -1.64
VPS53P47061 COX13YGL191W 390 nt4.83□□□□□ -1.64
VPS53P47061 SPO13YHR014W 876 nt4.83□□□□□ -1.64
VPS53P47061 RPL16AYIL133C 600 nt4.83□□□□□ -1.64
VPS53P47061 ASG7YJL170C 630 nt4.83□□□□□ -1.64
VPS53P47061 LSO1YJR005C-A 282 nt4.83□□□□□ -1.64
VPS53P47061 YRA2YKL214C 612 nt4.83□□□□□ -1.64
VPS53P47061 GCY1YOR120W 939 nt4.83□□□□□ -1.64
VPS53P47061 GRC3YLL035W 1899 nt4.83□□□□□ -1.64
VPS53P47061 RTS1YOR014W 2274 nt4.83□□□□□ -1.64
VPS53P47061 KEX1YGL203C 2190 nt4.82□□□□□ -1.64
VPS53P47061 ABF1YKL112W 2196 nt4.82□□□□□ -1.64
VPS53P47061 YKL075CYKL075C 1353 nt4.82□□□□□ -1.64
VPS53P47061 CUE3YGL110C 1875 nt4.82□□□□□ -1.64
VPS53P47061 YDL187CYDL187C 330 nt4.82□□□□□ -1.64
VPS53P47061 CWC2YDL209C 1020 nt4.82□□□□□ -1.64
VPS53P47061 IES5YER092W 378 nt4.82□□□□□ -1.64
VPS53P47061 YGR269WYGR269W 327 nt4.82□□□□□ -1.64
VPS53P47061 YML084WYML084W 309 nt4.82□□□□□ -1.64
VPS53P47061 YML099W-AYML099W-A 330 nt4.82□□□□□ -1.64
VPS53P47061 RPS10AYOR293W 318 nt4.82□□□□□ -1.64
VPS53P47061 RPS11BYBR048W 471 nt4.82□□□□□ -1.64
VPS53P47061 INA17YPL099C 549 nt4.82□□□□□ -1.64
VPS53P47061 YPL119C-AYPL119C-A 264 nt4.82□□□□□ -1.64
VPS53P47061 PBN1YCL052C 1251 nt4.82□□□□□ -1.64
VPS53P47061 APP1YNL094W 1764 nt4.82□□□□□ -1.64
VPS53P47061 MCM2YBL023C 2607 nt4.82□□□□□ -1.64
VPS53P47061 PIG2YIL045W 1617 nt4.82□□□□□ -1.64
VPS53P47061 SRP1YNL189W 1629 nt4.82□□□□□ -1.64
VPS53P47061 KIN2YLR096W 3444 nt4.82□□□□□ -1.64
VPS53P47061 IMD2YHR216W 1572 nt4.82□□□□□ -1.64
VPS53P47061 SWC3YAL011W 1878 nt4.81□□□□□ -1.64
VPS53P47061 MSC2YDR205W 2175 nt4.81□□□□□ -1.64
VPS53P47061 RTT109YLL002W 1311 nt4.81□□□□□ -1.64
VPS53P47061 YCL075WYCL075W 441 nt4.81□□□□□ -1.64
VPS53P47061 PBP4YDL053C 558 nt4.81□□□□□ -1.64
VPS53P47061 TMA17YDL110C 453 nt4.81□□□□□ -1.64
VPS53P47061 YDR381C-AYDR381C-A 345 nt4.81□□□□□ -1.64
VPS53P47061 tK(CUU)CtK(CUU)C 73 nt4.81□□□□□ -1.64
VPS53P47061 tK(CUU)D1tK(CUU)D1 73 nt4.81□□□□□ -1.64
VPS53P47061 tK(CUU)D2tK(CUU)D2 73 nt4.81□□□□□ -1.64
VPS53P47061 tK(CUU)E1tK(CUU)E1 73 nt4.81□□□□□ -1.64
VPS53P47061 tK(CUU)E2tK(CUU)E2 73 nt4.81□□□□□ -1.64
VPS53P47061 tK(CUU)FtK(CUU)F 73 nt4.81□□□□□ -1.64
VPS53P47061 tK(CUU)G1tK(CUU)G1 73 nt4.81□□□□□ -1.64
VPS53P47061 tK(CUU)G2tK(CUU)G2 73 nt4.81□□□□□ -1.64
VPS53P47061 tK(CUU)G3tK(CUU)G3 73 nt4.81□□□□□ -1.64
VPS53P47061 tK(CUU)ItK(CUU)I 73 nt4.81□□□□□ -1.64
VPS53P47061 tK(CUU)JtK(CUU)J 73 nt4.81□□□□□ -1.64
VPS53P47061 tK(CUU)KtK(CUU)K 73 nt4.81□□□□□ -1.64
VPS53P47061 tK(CUU)MtK(CUU)M 73 nt4.81□□□□□ -1.64
VPS53P47061 tK(CUU)PtK(CUU)P 73 nt4.81□□□□□ -1.64
VPS53P47061 VPH2YKL119C 648 nt4.81□□□□□ -1.64
VPS53P47061 HRI1YLR301W 735 nt4.81□□□□□ -1.64
VPS53P47061 YPL077CYPL077C 723 nt4.81□□□□□ -1.64
VPS53P47061 YPL135C-AYPL135C-A 174 nt4.81□□□□□ -1.64
VPS53P47061 CBP3YPL215W 1008 nt4.81□□□□□ -1.64
VPS53P47061 PIN3YPR154W 648 nt4.81□□□□□ -1.64
VPS53P47061 CDC6YJL194W 1542 nt4.81□□□□□ -1.64
VPS53P47061 YGR266WYGR266W 2106 nt4.81□□□□□ -1.64
VPS53P47061 MET32YDR253C 576 nt4.8□□□□□ -1.64
VPS53P47061 RIP1YEL024W 648 nt4.8□□□□□ -1.64
VPS53P47061 VMA8YEL051W 771 nt4.8□□□□□ -1.64
VPS53P47061 PUG1YER185W 912 nt4.8□□□□□ -1.64
VPS53P47061 PRE9YGR135W 777 nt4.8□□□□□ -1.64
VPS53P47061 MPC3YGR243W 441 nt4.8□□□□□ -1.64
VPS53P47061 UTP11YKL099C 753 nt4.8□□□□□ -1.64
VPS53P47061 YLR171WYLR171W 390 nt4.8□□□□□ -1.64
VPS53P47061 YNR021WYNR021W 1215 nt4.8□□□□□ -1.64
VPS53P47061 ARC40YBR234C 1155 nt4.8□□□□□ -1.64
VPS53P47061 SBE2YDR351W 2595 nt4.8□□□□□ -1.64
VPS53P47061 ZPR1YGR211W 1461 nt4.8□□□□□ -1.64
VPS53P47061 MCP2YLR253W 1710 nt4.8□□□□□ -1.64
VPS53P47061 KIC1YHR102W 3243 nt4.8□□□□□ -1.64
VPS53P47061 AVT5YBL089W 1380 nt4.79□□□□□ -1.64
VPS53P47061 YOR365CYOR365C 2112 nt4.79□□□□□ -1.64
VPS53P47061 ORC6YHR118C 1308 nt4.79□□□□□ -1.64
Retrieved 100 of 7,029 protein–RNA pairs in 23.6 ms