Protein–RNA interactions for Protein: P40084

RTR1, RNA polymerase II subunit B1 CTD phosphatase RTR1, yeastyeast

Predicted RBP Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RTR1P40084 YER039C-AYER039C-A 219 nt3.26□□□□□ -1.89
RTR1P40084 CDA2YLR308W 939 nt3.26□□□□□ -1.89
RTR1P40084 ALG8YOR067C 1734 nt3.26□□□□□ -1.89
RTR1P40084 SSE2YBR169C 2082 nt3.26□□□□□ -1.89
RTR1P40084 BCS1YDR375C 1371 nt3.25□□□□□ -1.89
RTR1P40084 PTP3YER075C 2787 nt3.25□□□□□ -1.89
RTR1P40084 SEC15YGL233W 2733 nt3.25□□□□□ -1.89
RTR1P40084 RPO41YFL036W 4056 nt3.25□□□□□ -1.89
RTR1P40084 YIR040CYIR040C 333 nt3.25□□□□□ -1.89
RTR1P40084 SFH5YJL145W 885 nt3.25□□□□□ -1.89
RTR1P40084 SAW1YAL027W 786 nt3.25□□□□□ -1.89
RTR1P40084 YJR111CYJR111C 852 nt3.25□□□□□ -1.89
RTR1P40084 PCD1YLR151C 1023 nt3.25□□□□□ -1.89
RTR1P40084 CYC2YOR037W 1101 nt3.25□□□□□ -1.89
RTR1P40084 SGT1YOR057W 1188 nt3.25□□□□□ -1.89
RTR1P40084 RPB8YOR224C 441 nt3.25□□□□□ -1.89
RTR1P40084 USV1YPL230W 1176 nt3.25□□□□□ -1.89
RTR1P40084 SRC1YML034W 2505 nt3.25□□□□□ -1.89
RTR1P40084 GIN4YDR507C 3429 nt3.25□□□□□ -1.89
RTR1P40084 PDR1YGL013C 3207 nt3.25□□□□□ -1.89
RTR1P40084 CDH1YGL003C 1701 nt3.24□□□□□ -1.89
RTR1P40084 RPS23AYGR118W 438 nt3.24□□□□□ -1.89
RTR1P40084 YHR213WYHR213W 597 nt3.24□□□□□ -1.89
RTR1P40084 PAU23YLR037C 375 nt3.24□□□□□ -1.89
RTR1P40084 YAR062WYAR062W 597 nt3.24□□□□□ -1.89
RTR1P40084 OST6YML019W 999 nt3.24□□□□□ -1.89
RTR1P40084 RLP7YNL002C 969 nt3.24□□□□□ -1.89
RTR1P40084 BUD21YOR078W 645 nt3.24□□□□□ -1.89
RTR1P40084 RPS23BYPR132W 438 nt3.24□□□□□ -1.89
RTR1P40084 NEW1YPL226W 3591 nt3.24□□□□□ -1.89
RTR1P40084 FKS3YMR306W 5358 nt3.24□□□□□ -1.89
RTR1P40084 RTT10YPL183C 3042 nt3.24□□□□□ -1.89
RTR1P40084 LCB4YOR171C 1875 nt3.24□□□□□ -1.89
RTR1P40084 INP52YNL106C 3552 nt3.23□□□□□ -1.89
RTR1P40084 YGR237CYGR237C 2358 nt3.23□□□□□ -1.89
RTR1P40084 GRX3YDR098C 858 nt3.23□□□□□ -1.89
RTR1P40084 RPS28BYLR264W 204 nt3.23□□□□□ -1.89
RTR1P40084 YBR096WYBR096W 693 nt3.23□□□□□ -1.89
RTR1P40084 snR43snR43 209 nt3.23□□□□□ -1.89
RTR1P40084 YMR018WYMR018W 1545 nt3.23□□□□□ -1.89
RTR1P40084 YHL012WYHL012W 1482 nt3.22□□□□□ -1.89
RTR1P40084 ERG9YHR190W 1335 nt3.22□□□□□ -1.89
RTR1P40084 IOC3YFR013W 2364 nt3.22□□□□□ -1.89
RTR1P40084 YHP1YDR451C 1062 nt3.22□□□□□ -1.89
RTR1P40084 SAS5YOR213C 747 nt3.22□□□□□ -1.89
RTR1P40084 YBR085C-AYBR085C-A 258 nt3.22□□□□□ -1.89
RTR1P40084 HPA2YPR193C 471 nt3.22□□□□□ -1.89
RTR1P40084 YBR089WYBR089W 600 nt3.22□□□□□ -1.89
RTR1P40084 ENA5YDR038C 3276 nt3.22□□□□□ -1.89
RTR1P40084 YPR148CYPR148C 1308 nt3.21□□□□□ -1.89
RTR1P40084 ESL2YKR096W 3588 nt3.21□□□□□ -1.9
RTR1P40084 RPS29BYDL061C 171 nt3.21□□□□□ -1.9
RTR1P40084 YVH1YIR026C 1095 nt3.21□□□□□ -1.9
RTR1P40084 YKR075CYKR075C 924 nt3.21□□□□□ -1.9
RTR1P40084 PBA1YLR199C 831 nt3.21□□□□□ -1.9
RTR1P40084 YNL144W-AYNL144W-A 84 nt3.21□□□□□ -1.9
RTR1P40084 RAS1YOR101W 930 nt3.21□□□□□ -1.9
RTR1P40084 RPL36BYPL249C-A 303 nt3.21□□□□□ -1.9
RTR1P40084 DBP7YKR024C 2229 nt3.2□□□□□ -1.9
RTR1P40084 MET5YJR137C 4329 nt3.2□□□□□ -1.9
RTR1P40084 RRP1YDR087C 837 nt3.2□□□□□ -1.9
RTR1P40084 YGR026WYGR026W 837 nt3.2□□□□□ -1.9
RTR1P40084 PEX21YGR239C 867 nt3.2□□□□□ -1.9
RTR1P40084 EMC6YLL014W 327 nt3.2□□□□□ -1.9
RTR1P40084 RRD2YPL152W 1077 nt3.2□□□□□ -1.9
RTR1P40084 PDR3YBL005W 2931 nt3.2□□□□□ -1.9
RTR1P40084 TFC1YBR123C 1950 nt3.2□□□□□ -1.9
RTR1P40084 TOM1YDR457W 9807 nt3.19□□□□□ -1.9
RTR1P40084 CLB5YPR120C 1308 nt3.19□□□□□ -1.9
RTR1P40084 YLR001CYLR001C 2589 nt3.19□□□□□ -1.9
RTR1P40084 DOA4YDR069C 2781 nt3.19□□□□□ -1.9
RTR1P40084 YAK1YJL141C 2424 nt3.19□□□□□ -1.9
RTR1P40084 TAM41YGR046W 1158 nt3.19□□□□□ -1.9
RTR1P40084 MPC3YGR243W 441 nt3.19□□□□□ -1.9
RTR1P40084 COQ9YLR201C 783 nt3.19□□□□□ -1.9
RTR1P40084 YOR050CYOR050C 348 nt3.19□□□□□ -1.9
RTR1P40084 CAF120YNL278W 3183 nt3.18□□□□□ -1.9
RTR1P40084 NDC80YIL144W 2076 nt3.18□□□□□ -1.9
RTR1P40084 MIF2YKL089W 1650 nt3.18□□□□□ -1.9
RTR1P40084 CYR1YJL005W 6081 nt3.18□□□□□ -1.9
RTR1P40084 VAC14YLR386W 2643 nt3.18□□□□□ -1.9
RTR1P40084 YDL162CYDL162C 357 nt3.18□□□□□ -1.9
RTR1P40084 MST27YGL051W 705 nt3.18□□□□□ -1.9
RTR1P40084 KXD1YGL079W 657 nt3.18□□□□□ -1.9
RTR1P40084 AIM25YJR100C 984 nt3.18□□□□□ -1.9
RTR1P40084 YLR154C-HYLR154C-H 132 nt3.18□□□□□ -1.9
RTR1P40084 YLR156C-AYLR156C-A 132 nt3.18□□□□□ -1.9
RTR1P40084 YLR157C-CYLR157C-C 132 nt3.18□□□□□ -1.9
RTR1P40084 YLR159C-AYLR159C-A 132 nt3.18□□□□□ -1.9
RTR1P40084 YLR416CYLR416C 399 nt3.18□□□□□ -1.9
RTR1P40084 YMR141CYMR141C 309 nt3.18□□□□□ -1.9
RTR1P40084 DBP5YOR046C 1449 nt3.18□□□□□ -1.9
RTR1P40084 TCP1YDR212W 1680 nt3.17□□□□□ -1.9
RTR1P40084 FRE4YNR060W 2160 nt3.17□□□□□ -1.9
RTR1P40084 MSM1YGR171C 1728 nt3.17□□□□□ -1.9
RTR1P40084 TGL2YDR058C 981 nt3.17□□□□□ -1.9
RTR1P40084 RRP8YDR083W 1179 nt3.17□□□□□ -1.9
RTR1P40084 YOS1YER074W-A 258 nt3.17□□□□□ -1.9
RTR1P40084 MFA2YNL145W 117 nt3.17□□□□□ -1.9
RTR1P40084 YOR055WYOR055W 435 nt3.17□□□□□ -1.9
Retrieved 100 of 7,029 protein–RNA pairs in 17.2 ms