Protein–RNA interactions for Protein: P29373

CRABP2, Cellular retinoic acid-binding protein 2, humanhuman

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CRABP2P29373 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC21.17■□□□□ 0.98
CRABP2P29373 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CRABP2P29373 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
CRABP2P29373 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC21.17■□□□□ 0.98
CRABP2P29373 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CRABP2P29373 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CRABP2P29373 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC21.17■□□□□ 0.98
CRABP2P29373 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC21.17■□□□□ 0.98
CRABP2P29373 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
CRABP2P29373 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CRABP2P29373 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
CRABP2P29373 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
CRABP2P29373 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CRABP2P29373 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CRABP2P29373 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC21.16■□□□□ 0.98
CRABP2P29373 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
CRABP2P29373 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CRABP2P29373 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
CRABP2P29373 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CRABP2P29373 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CRABP2P29373 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC21.16■□□□□ 0.98
CRABP2P29373 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
CRABP2P29373 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
CRABP2P29373 SLC47A1P1-202ENST00000449666 945 ntBASIC21.16■□□□□ 0.98
CRABP2P29373 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC21.16■□□□□ 0.98
CRABP2P29373 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC21.16■□□□□ 0.98
CRABP2P29373 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CRABP2P29373 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
CRABP2P29373 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CRABP2P29373 AP004607.7-201ENST00000527152 1677 ntBASIC21.15■□□□□ 0.98
CRABP2P29373 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC21.15■□□□□ 0.98
CRABP2P29373 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC21.15■□□□□ 0.98
CRABP2P29373 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
CRABP2P29373 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
CRABP2P29373 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
CRABP2P29373 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CRABP2P29373 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CRABP2P29373 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
CRABP2P29373 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
CRABP2P29373 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC21.15■□□□□ 0.98
CRABP2P29373 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.98
CRABP2P29373 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
CRABP2P29373 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
CRABP2P29373 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
CRABP2P29373 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
CRABP2P29373 AC131281.2-201ENST00000520478 145 ntBASIC21.14■□□□□ 0.97
CRABP2P29373 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC21.14■□□□□ 0.97
CRABP2P29373 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CRABP2P29373 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CRABP2P29373 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC21.14■□□□□ 0.97
CRABP2P29373 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC21.14■□□□□ 0.97
CRABP2P29373 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC21.14■□□□□ 0.97
CRABP2P29373 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
CRABP2P29373 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CRABP2P29373 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CRABP2P29373 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC21.13■□□□□ 0.97
CRABP2P29373 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
CRABP2P29373 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
CRABP2P29373 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
CRABP2P29373 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CRABP2P29373 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC21.13■□□□□ 0.97
CRABP2P29373 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CRABP2P29373 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
CRABP2P29373 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
CRABP2P29373 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
CRABP2P29373 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC21.13■□□□□ 0.97
CRABP2P29373 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
CRABP2P29373 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC21.13■□□□□ 0.97
CRABP2P29373 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CRABP2P29373 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
CRABP2P29373 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CRABP2P29373 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
CRABP2P29373 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
CRABP2P29373 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CRABP2P29373 SNX3-202ENST00000349379 890 ntTSL 2 BASIC21.12■□□□□ 0.97
CRABP2P29373 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CRABP2P29373 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC21.12■□□□□ 0.97
CRABP2P29373 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC21.12■□□□□ 0.97
CRABP2P29373 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
CRABP2P29373 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
CRABP2P29373 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
CRABP2P29373 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CRABP2P29373 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CRABP2P29373 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CRABP2P29373 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CRABP2P29373 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CRABP2P29373 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC21.11■□□□□ 0.97
CRABP2P29373 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CRABP2P29373 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
CRABP2P29373 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CRABP2P29373 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC21.11■□□□□ 0.97
CRABP2P29373 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC21.1■□□□□ 0.97
CRABP2P29373 AF106564.1-201ENST00000607058 2553 ntBASIC21.1■□□□□ 0.97
CRABP2P29373 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CRABP2P29373 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC21.1■□□□□ 0.97
CRABP2P29373 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
CRABP2P29373 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CRABP2P29373 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
CRABP2P29373 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC21.1■□□□□ 0.97
CRABP2P29373 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC21.1■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 23.4 ms