Protein–RNA interactions for Protein: P19397

CD53, Leukocyte surface antigen CD53, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD53P19397 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
CD53P19397 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
CD53P19397 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC19.25■□□□□ 0.67
CD53P19397 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC19.25■□□□□ 0.67
CD53P19397 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC19.25■□□□□ 0.67
CD53P19397 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC19.25■□□□□ 0.67
CD53P19397 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC19.25■□□□□ 0.67
CD53P19397 AL358852.1-201ENST00000623174 1268 ntBASIC19.25■□□□□ 0.67
CD53P19397 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC19.25■□□□□ 0.67
CD53P19397 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC19.25■□□□□ 0.67
CD53P19397 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CD53P19397 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
CD53P19397 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CD53P19397 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC19.24■□□□□ 0.67
CD53P19397 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC19.24■□□□□ 0.67
CD53P19397 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC19.24■□□□□ 0.67
CD53P19397 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
CD53P19397 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CD53P19397 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC19.24■□□□□ 0.67
CD53P19397 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
CD53P19397 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CD53P19397 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CD53P19397 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC19.24■□□□□ 0.67
CD53P19397 AC027612.3-201ENST00000413684 1047 ntBASIC19.24■□□□□ 0.67
CD53P19397 AC123595.1-201ENST00000440769 1046 ntBASIC19.24■□□□□ 0.67
CD53P19397 AICDA-202ENST00000537228 667 ntTSL 5 BASIC19.24■□□□□ 0.67
CD53P19397 AC005229.4-201ENST00000610085 2198 ntBASIC19.24■□□□□ 0.67
CD53P19397 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CD53P19397 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
CD53P19397 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC19.24■□□□□ 0.67
CD53P19397 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
CD53P19397 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CD53P19397 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CD53P19397 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC19.24■□□□□ 0.67
CD53P19397 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
CD53P19397 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC19.24■□□□□ 0.67
CD53P19397 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
CD53P19397 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
CD53P19397 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC19.23■□□□□ 0.67
CD53P19397 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CD53P19397 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CD53P19397 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC19.23■□□□□ 0.67
CD53P19397 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC19.23■□□□□ 0.67
CD53P19397 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC19.23■□□□□ 0.67
CD53P19397 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CD53P19397 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CD53P19397 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CD53P19397 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC19.23■□□□□ 0.67
CD53P19397 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC19.23■□□□□ 0.67
CD53P19397 GTSE1-AS1-202ENST00000623117 1518 ntBASIC19.23■□□□□ 0.67
CD53P19397 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
CD53P19397 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CD53P19397 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC19.23■□□□□ 0.67
CD53P19397 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CD53P19397 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CD53P19397 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC19.23■□□□□ 0.67
CD53P19397 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CD53P19397 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
CD53P19397 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CD53P19397 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC19.22■□□□□ 0.67
CD53P19397 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CD53P19397 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC19.22■□□□□ 0.67
CD53P19397 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CD53P19397 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CD53P19397 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CD53P19397 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CD53P19397 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
CD53P19397 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC19.22■□□□□ 0.67
CD53P19397 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC19.22■□□□□ 0.67
CD53P19397 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
CD53P19397 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CD53P19397 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC19.22■□□□□ 0.67
CD53P19397 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CD53P19397 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC19.22■□□□□ 0.67
CD53P19397 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CD53P19397 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
CD53P19397 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CD53P19397 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC19.21■□□□□ 0.67
CD53P19397 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC19.21■□□□□ 0.67
CD53P19397 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CD53P19397 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CD53P19397 AC004911.1-201ENST00000416316 871 ntBASIC19.21■□□□□ 0.67
CD53P19397 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
CD53P19397 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC19.21■□□□□ 0.67
CD53P19397 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC19.21■□□□□ 0.67
CD53P19397 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC19.21■□□□□ 0.67
CD53P19397 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC19.21■□□□□ 0.67
CD53P19397 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC19.21■□□□□ 0.67
CD53P19397 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CD53P19397 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CD53P19397 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CD53P19397 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
CD53P19397 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CD53P19397 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC19.2■□□□□ 0.66
CD53P19397 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
CD53P19397 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
CD53P19397 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC19.2■□□□□ 0.66
CD53P19397 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC19.2■□□□□ 0.66
CD53P19397 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC19.2■□□□□ 0.66
CD53P19397 DUX4L4-201ENST00000566884 1269 ntBASIC19.2■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 15.4 ms