Protein–RNA interactions for Protein: P18615

NELFE, Negative elongation factor E, humanhuman

Known RBP Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NELFEP18615 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
NELFEP18615 AC022517.1-201ENST00000592429 346 ntBASIC20.93■□□□□ 0.94
NELFEP18615 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC20.93■□□□□ 0.94
NELFEP18615 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC20.93■□□□□ 0.94
NELFEP18615 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
NELFEP18615 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
NELFEP18615 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC20.93■□□□□ 0.94
NELFEP18615 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC20.93■□□□□ 0.94
NELFEP18615 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC20.92■□□□□ 0.94
NELFEP18615 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
NELFEP18615 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC20.92■□□□□ 0.94
NELFEP18615 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
NELFEP18615 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
NELFEP18615 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
NELFEP18615 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
NELFEP18615 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
NELFEP18615 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
NELFEP18615 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
NELFEP18615 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC20.92■□□□□ 0.94
NELFEP18615 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
NELFEP18615 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
NELFEP18615 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
NELFEP18615 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC20.92■□□□□ 0.94
NELFEP18615 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
NELFEP18615 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
NELFEP18615 AC073130.3-201ENST00000624389 2278 ntBASIC20.92■□□□□ 0.94
NELFEP18615 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC20.92■□□□□ 0.94
NELFEP18615 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
NELFEP18615 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
NELFEP18615 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
NELFEP18615 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC20.91■□□□□ 0.94
NELFEP18615 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
NELFEP18615 OXCT2P1-201ENST00000447263 1535 ntBASIC20.91■□□□□ 0.94
NELFEP18615 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC20.91■□□□□ 0.94
NELFEP18615 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC20.91■□□□□ 0.94
NELFEP18615 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
NELFEP18615 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC20.91■□□□□ 0.94
NELFEP18615 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC20.91■□□□□ 0.94
NELFEP18615 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
NELFEP18615 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
NELFEP18615 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
NELFEP18615 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC20.9■□□□□ 0.94
NELFEP18615 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
NELFEP18615 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC20.9■□□□□ 0.94
NELFEP18615 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
NELFEP18615 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
NELFEP18615 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
NELFEP18615 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
NELFEP18615 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
NELFEP18615 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
NELFEP18615 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
NELFEP18615 SMUG1P1-201ENST00000590640 811 ntBASIC20.9■□□□□ 0.94
NELFEP18615 NTF6G-201ENST00000591094 616 ntBASIC20.9■□□□□ 0.94
NELFEP18615 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC20.9■□□□□ 0.94
NELFEP18615 TPRG1LP1-201ENST00000598702 760 ntBASIC20.9■□□□□ 0.94
NELFEP18615 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
NELFEP18615 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
NELFEP18615 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
NELFEP18615 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC20.9■□□□□ 0.94
NELFEP18615 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
NELFEP18615 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC20.9■□□□□ 0.94
NELFEP18615 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC20.9■□□□□ 0.94
NELFEP18615 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
NELFEP18615 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC20.89■□□□□ 0.94
NELFEP18615 BX005040.4-201ENST00000637145 1518 ntBASIC20.89■□□□□ 0.94
NELFEP18615 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
NELFEP18615 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
NELFEP18615 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
NELFEP18615 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC20.89■□□□□ 0.93
NELFEP18615 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC20.89■□□□□ 0.93
NELFEP18615 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC20.89■□□□□ 0.93
NELFEP18615 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.93
NELFEP18615 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
NELFEP18615 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
NELFEP18615 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC20.88■□□□□ 0.93
NELFEP18615 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
NELFEP18615 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
NELFEP18615 FBXW4P1-201ENST00000426721 2239 ntBASIC20.88■□□□□ 0.93
NELFEP18615 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
NELFEP18615 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC20.88■□□□□ 0.93
NELFEP18615 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
NELFEP18615 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
NELFEP18615 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC20.88■□□□□ 0.93
NELFEP18615 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC20.88■□□□□ 0.93
NELFEP18615 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
NELFEP18615 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
NELFEP18615 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
NELFEP18615 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
NELFEP18615 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC20.88■□□□□ 0.93
NELFEP18615 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
NELFEP18615 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
NELFEP18615 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
NELFEP18615 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
NELFEP18615 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC20.87■□□□□ 0.93
NELFEP18615 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
NELFEP18615 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
NELFEP18615 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
NELFEP18615 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
NELFEP18615 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
NELFEP18615 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC20.87■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 44.6 ms