Protein–RNA interactions for Protein: P11441

UBL4A, Ubiquitin-like protein 4A, humanhuman

Predictions only

Length 157 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBL4AP11441 AC010542.4-201ENST00000563151 1910 ntBASIC19.63■□□□□ 0.73
UBL4AP11441 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC19.62■□□□□ 0.73
UBL4AP11441 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC19.62■□□□□ 0.73
UBL4AP11441 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
UBL4AP11441 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
UBL4AP11441 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
UBL4AP11441 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC19.62■□□□□ 0.73
UBL4AP11441 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
UBL4AP11441 HYI-206ENST00000372434 1025 ntTSL 5 BASIC19.62■□□□□ 0.73
UBL4AP11441 MFF-208ENST00000409616 1247 ntTSL 5 BASIC19.62■□□□□ 0.73
UBL4AP11441 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
UBL4AP11441 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC19.62■□□□□ 0.73
UBL4AP11441 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC19.62■□□□□ 0.73
UBL4AP11441 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC19.62■□□□□ 0.73
UBL4AP11441 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
UBL4AP11441 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
UBL4AP11441 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
UBL4AP11441 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
UBL4AP11441 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
UBL4AP11441 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
UBL4AP11441 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
UBL4AP11441 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
UBL4AP11441 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC19.61■□□□□ 0.73
UBL4AP11441 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
UBL4AP11441 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC19.61■□□□□ 0.73
UBL4AP11441 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC19.61■□□□□ 0.73
UBL4AP11441 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC19.61■□□□□ 0.73
UBL4AP11441 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC19.61■□□□□ 0.73
UBL4AP11441 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC19.61■□□□□ 0.73
UBL4AP11441 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
UBL4AP11441 ASL-203ENST00000380839 1765 ntTSL 5 BASIC19.61■□□□□ 0.73
UBL4AP11441 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC19.61■□□□□ 0.73
UBL4AP11441 WWC2-AS2-201ENST00000578387 2183 ntBASIC19.61■□□□□ 0.73
UBL4AP11441 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC19.61■□□□□ 0.73
UBL4AP11441 GOLGA2P6-201ENST00000340929 2049 ntBASIC19.61■□□□□ 0.73
UBL4AP11441 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
UBL4AP11441 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
UBL4AP11441 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC19.61■□□□□ 0.73
UBL4AP11441 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
UBL4AP11441 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
UBL4AP11441 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
UBL4AP11441 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
UBL4AP11441 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
UBL4AP11441 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
UBL4AP11441 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
UBL4AP11441 AC105265.2-201ENST00000467189 838 ntBASIC19.6■□□□□ 0.73
UBL4AP11441 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC19.6■□□□□ 0.73
UBL4AP11441 AC026471.6-201ENST00000622954 1905 ntBASIC19.6■□□□□ 0.73
UBL4AP11441 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
UBL4AP11441 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
UBL4AP11441 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
UBL4AP11441 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
UBL4AP11441 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
UBL4AP11441 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC19.59■□□□□ 0.73
UBL4AP11441 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
UBL4AP11441 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
UBL4AP11441 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
UBL4AP11441 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
UBL4AP11441 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
UBL4AP11441 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
UBL4AP11441 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
UBL4AP11441 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC19.59■□□□□ 0.73
UBL4AP11441 STOX2-205ENST00000513034 807 ntTSL 3 BASIC19.59■□□□□ 0.73
UBL4AP11441 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC19.59■□□□□ 0.73
UBL4AP11441 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC19.59■□□□□ 0.73
UBL4AP11441 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC19.59■□□□□ 0.73
UBL4AP11441 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
UBL4AP11441 PALM-208ENST00000592155 2272 ntTSL 4 BASIC19.59■□□□□ 0.73
UBL4AP11441 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
UBL4AP11441 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
UBL4AP11441 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
UBL4AP11441 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC19.59■□□□□ 0.73
UBL4AP11441 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
UBL4AP11441 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.73
UBL4AP11441 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
UBL4AP11441 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC19.58■□□□□ 0.73
UBL4AP11441 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC19.58■□□□□ 0.73
UBL4AP11441 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
UBL4AP11441 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
UBL4AP11441 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC19.58■□□□□ 0.73
UBL4AP11441 AP006587.3-201ENST00000525742 1516 ntBASIC19.58■□□□□ 0.73
UBL4AP11441 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC19.58■□□□□ 0.72
UBL4AP11441 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC19.58■□□□□ 0.72
UBL4AP11441 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC19.58■□□□□ 0.72
UBL4AP11441 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC19.58■□□□□ 0.72
UBL4AP11441 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
UBL4AP11441 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
UBL4AP11441 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC19.58■□□□□ 0.72
UBL4AP11441 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
UBL4AP11441 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.72
UBL4AP11441 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.72
UBL4AP11441 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
UBL4AP11441 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC19.58■□□□□ 0.72
UBL4AP11441 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC19.57■□□□□ 0.72
UBL4AP11441 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
UBL4AP11441 ME2-206ENST00000638410 2289 ntTSL 5 BASIC19.57■□□□□ 0.72
UBL4AP11441 ME2-210ENST00000639255 2262 ntTSL 5 BASIC19.57■□□□□ 0.72
UBL4AP11441 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
UBL4AP11441 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC19.57■□□□□ 0.72
UBL4AP11441 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms