Protein–RNA interactions for Protein: P10645

CHGA, Chromogranin-A, humanhuman

Known RBP Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHGAP10645 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC30.78■■■□□ 2.52
CHGAP10645 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC30.78■■■□□ 2.52
CHGAP10645 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC30.78■■■□□ 2.52
CHGAP10645 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC30.77■■■□□ 2.52
CHGAP10645 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC30.77■■■□□ 2.52
CHGAP10645 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC30.77■■■□□ 2.52
CHGAP10645 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC30.77■■■□□ 2.52
CHGAP10645 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC30.77■■■□□ 2.52
CHGAP10645 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC30.77■■■□□ 2.52
CHGAP10645 AC120498.10-201ENST00000621827 505 ntBASIC30.77■■■□□ 2.52
CHGAP10645 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC30.76■■■□□ 2.51
CHGAP10645 RARRES2P4-201ENST00000514074 484 ntBASIC30.76■■■□□ 2.51
CHGAP10645 AC008175.2-201ENST00000612840 297 ntBASIC30.76■■■□□ 2.51
CHGAP10645 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC30.76■■■□□ 2.51
CHGAP10645 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC30.75■■■□□ 2.51
CHGAP10645 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC30.75■■■□□ 2.51
CHGAP10645 AL512625.2-201ENST00000417533 625 ntBASIC30.75■■■□□ 2.51
CHGAP10645 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC30.75■■■□□ 2.51
CHGAP10645 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC30.75■■■□□ 2.51
CHGAP10645 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC30.75■■■□□ 2.51
CHGAP10645 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC30.75■■■□□ 2.51
CHGAP10645 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC30.75■■■□□ 2.51
CHGAP10645 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC30.74■■■□□ 2.51
CHGAP10645 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC30.74■■■□□ 2.51
CHGAP10645 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC30.74■■■□□ 2.51
CHGAP10645 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC30.74■■■□□ 2.51
CHGAP10645 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC30.74■■■□□ 2.51
CHGAP10645 AC083880.1-201ENST00000608266 535 ntBASIC30.74■■■□□ 2.51
CHGAP10645 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC30.74■■■□□ 2.51
CHGAP10645 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC30.74■■■□□ 2.51
CHGAP10645 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC30.74■■■□□ 2.51
CHGAP10645 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC30.73■■■□□ 2.51
CHGAP10645 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC30.73■■■□□ 2.51
CHGAP10645 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC30.73■■■□□ 2.51
CHGAP10645 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC30.73■■■□□ 2.51
CHGAP10645 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC30.73■■■□□ 2.51
CHGAP10645 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC30.73■■■□□ 2.51
CHGAP10645 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC30.73■■■□□ 2.51
CHGAP10645 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC30.73■■■□□ 2.51
CHGAP10645 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC30.73■■■□□ 2.51
CHGAP10645 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC30.73■■■□□ 2.51
CHGAP10645 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC30.73■■■□□ 2.51
CHGAP10645 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC30.73■■■□□ 2.51
CHGAP10645 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC30.73■■■□□ 2.51
CHGAP10645 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC30.72■■■□□ 2.51
CHGAP10645 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC30.72■■■□□ 2.51
CHGAP10645 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC30.72■■■□□ 2.51
CHGAP10645 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC30.72■■■□□ 2.51
CHGAP10645 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC30.72■■■□□ 2.51
CHGAP10645 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC30.72■■■□□ 2.51
CHGAP10645 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC30.72■■■□□ 2.51
CHGAP10645 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC30.72■■■□□ 2.51
CHGAP10645 RPS2P52-201ENST00000469610 820 ntBASIC30.72■■■□□ 2.51
CHGAP10645 RNF146-206ENST00000480444 843 ntTSL 2 BASIC30.72■■■□□ 2.51
CHGAP10645 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC30.72■■■□□ 2.51
CHGAP10645 AC137767.1-201ENST00000602918 1920 ntBASIC30.72■■■□□ 2.51
CHGAP10645 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC30.72■■■□□ 2.51
CHGAP10645 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC30.72■■■□□ 2.51
CHGAP10645 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC30.72■■■□□ 2.51
CHGAP10645 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC30.72■■■□□ 2.51
CHGAP10645 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC30.72■■■□□ 2.51
CHGAP10645 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC30.71■■■□□ 2.51
CHGAP10645 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC30.71■■■□□ 2.51
CHGAP10645 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC30.7■■■□□ 2.51
CHGAP10645 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC30.7■■■□□ 2.51
CHGAP10645 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC30.7■■■□□ 2.51
CHGAP10645 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC30.7■■■□□ 2.51
CHGAP10645 BET1L-207ENST00000529614 560 ntTSL 5 BASIC30.7■■■□□ 2.51
CHGAP10645 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC30.7■■■□□ 2.51
CHGAP10645 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC30.7■■■□□ 2.51
CHGAP10645 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC30.7■■■□□ 2.5
CHGAP10645 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC30.7■■■□□ 2.5
CHGAP10645 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC30.7■■■□□ 2.5
CHGAP10645 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC30.69■■■□□ 2.5
CHGAP10645 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC30.69■■■□□ 2.5
CHGAP10645 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC30.69■■■□□ 2.5
CHGAP10645 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC30.69■■■□□ 2.5
CHGAP10645 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC30.69■■■□□ 2.5
CHGAP10645 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC30.69■■■□□ 2.5
CHGAP10645 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC30.69■■■□□ 2.5
CHGAP10645 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC30.69■■■□□ 2.5
CHGAP10645 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC30.69■■■□□ 2.5
CHGAP10645 RHEB-204ENST00000472642 900 ntTSL 3 BASIC30.69■■■□□ 2.5
CHGAP10645 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC30.69■■■□□ 2.5
CHGAP10645 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC30.69■■■□□ 2.5
CHGAP10645 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC30.69■■■□□ 2.5
CHGAP10645 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC30.69■■■□□ 2.5
CHGAP10645 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC30.69■■■□□ 2.5
CHGAP10645 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC30.69■■■□□ 2.5
CHGAP10645 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC30.69■■■□□ 2.5
CHGAP10645 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC30.69■■■□□ 2.5
CHGAP10645 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC30.69■■■□□ 2.5
CHGAP10645 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC30.68■■■□□ 2.5
CHGAP10645 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC30.68■■■□□ 2.5
CHGAP10645 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC30.68■■■□□ 2.5
CHGAP10645 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC30.68■■■□□ 2.5
CHGAP10645 AC097658.1-201ENST00000475555 843 ntBASIC30.68■■■□□ 2.5
CHGAP10645 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC30.68■■■□□ 2.5
CHGAP10645 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC30.68■■■□□ 2.5
CHGAP10645 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC30.68■■■□□ 2.5
Retrieved 100 of 98,524 protein–RNA pairs in 18.4 ms