Protein–RNA interactions for Protein: P0C0E4

RAB40AL, Ras-related protein Rab-40A-like, humanhuman

Predictions only

Length 278 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40ALP0C0E4 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
RAB40ALP0C0E4 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
RAB40ALP0C0E4 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
RAB40ALP0C0E4 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
RAB40ALP0C0E4 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC20.07■□□□□ 0.8
RAB40ALP0C0E4 AP006587.3-201ENST00000525742 1516 ntBASIC20.07■□□□□ 0.8
RAB40ALP0C0E4 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
RAB40ALP0C0E4 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC20.06■□□□□ 0.8
RAB40ALP0C0E4 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
RAB40ALP0C0E4 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
RAB40ALP0C0E4 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
RAB40ALP0C0E4 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
RAB40ALP0C0E4 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC20.06■□□□□ 0.8
RAB40ALP0C0E4 EEF1DP3-203ENST00000566025 782 ntBASIC20.06■□□□□ 0.8
RAB40ALP0C0E4 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
RAB40ALP0C0E4 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC20.06■□□□□ 0.8
RAB40ALP0C0E4 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC20.06■□□□□ 0.8
RAB40ALP0C0E4 AC053503.5-201ENST00000601508 636 ntBASIC20.06■□□□□ 0.8
RAB40ALP0C0E4 AL121832.2-201ENST00000610979 668 ntBASIC20.06■□□□□ 0.8
RAB40ALP0C0E4 MAZ-216ENST00000616501 991 ntTSL 5 BASIC20.06■□□□□ 0.8
RAB40ALP0C0E4 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
RAB40ALP0C0E4 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC20.06■□□□□ 0.8
RAB40ALP0C0E4 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
RAB40ALP0C0E4 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC20.06■□□□□ 0.8
RAB40ALP0C0E4 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
RAB40ALP0C0E4 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
RAB40ALP0C0E4 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
RAB40ALP0C0E4 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
RAB40ALP0C0E4 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
RAB40ALP0C0E4 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC20.05■□□□□ 0.8
RAB40ALP0C0E4 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC20.05■□□□□ 0.8
RAB40ALP0C0E4 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
RAB40ALP0C0E4 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
RAB40ALP0C0E4 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
RAB40ALP0C0E4 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC20.05■□□□□ 0.8
RAB40ALP0C0E4 SLC7A5P1-201ENST00000568957 537 ntBASIC20.05■□□□□ 0.8
RAB40ALP0C0E4 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC20.05■□□□□ 0.8
RAB40ALP0C0E4 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
RAB40ALP0C0E4 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
RAB40ALP0C0E4 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
RAB40ALP0C0E4 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
RAB40ALP0C0E4 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
RAB40ALP0C0E4 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
RAB40ALP0C0E4 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
RAB40ALP0C0E4 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC20.04■□□□□ 0.8
RAB40ALP0C0E4 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
RAB40ALP0C0E4 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC20.04■□□□□ 0.8
RAB40ALP0C0E4 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
RAB40ALP0C0E4 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC20.04■□□□□ 0.8
RAB40ALP0C0E4 AC005181.1-201ENST00000604782 1256 ntBASIC20.04■□□□□ 0.8
RAB40ALP0C0E4 WT1-AS_3.1-201ENST00000613262 234 ntBASIC20.04■□□□□ 0.8
RAB40ALP0C0E4 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
RAB40ALP0C0E4 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
RAB40ALP0C0E4 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
RAB40ALP0C0E4 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
RAB40ALP0C0E4 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
RAB40ALP0C0E4 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
RAB40ALP0C0E4 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
RAB40ALP0C0E4 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
RAB40ALP0C0E4 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
RAB40ALP0C0E4 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
RAB40ALP0C0E4 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
RAB40ALP0C0E4 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC20.03■□□□□ 0.8
RAB40ALP0C0E4 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC20.03■□□□□ 0.8
RAB40ALP0C0E4 AL355802.2-201ENST00000402069 882 ntBASIC20.03■□□□□ 0.8
RAB40ALP0C0E4 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC20.03■□□□□ 0.8
RAB40ALP0C0E4 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC20.03■□□□□ 0.8
RAB40ALP0C0E4 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC20.03■□□□□ 0.8
RAB40ALP0C0E4 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
RAB40ALP0C0E4 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC20.03■□□□□ 0.8
RAB40ALP0C0E4 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
RAB40ALP0C0E4 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
RAB40ALP0C0E4 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
RAB40ALP0C0E4 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
RAB40ALP0C0E4 GALC-202ENST00000393568 2054 ntTSL 2 BASIC20.03■□□□□ 0.8
RAB40ALP0C0E4 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
RAB40ALP0C0E4 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
RAB40ALP0C0E4 AC137767.1-201ENST00000602918 1920 ntBASIC20.02■□□□□ 0.8
RAB40ALP0C0E4 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC20.02■□□□□ 0.8
RAB40ALP0C0E4 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
RAB40ALP0C0E4 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
RAB40ALP0C0E4 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
RAB40ALP0C0E4 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC20.02■□□□□ 0.8
RAB40ALP0C0E4 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC20.02■□□□□ 0.8
RAB40ALP0C0E4 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC20.02■□□□□ 0.8
RAB40ALP0C0E4 AL050303.2-201ENST00000619798 666 ntBASIC20.02■□□□□ 0.8
RAB40ALP0C0E4 AC010536.3-201ENST00000620306 533 ntBASIC20.02■□□□□ 0.8
RAB40ALP0C0E4 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC20.02■□□□□ 0.8
RAB40ALP0C0E4 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
RAB40ALP0C0E4 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC20.02■□□□□ 0.8
RAB40ALP0C0E4 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
RAB40ALP0C0E4 AC087742.1-201ENST00000575880 1738 ntBASIC20.02■□□□□ 0.79
RAB40ALP0C0E4 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
RAB40ALP0C0E4 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.79
RAB40ALP0C0E4 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
RAB40ALP0C0E4 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
RAB40ALP0C0E4 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC20.01■□□□□ 0.79
RAB40ALP0C0E4 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
RAB40ALP0C0E4 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC20.01■□□□□ 0.79
RAB40ALP0C0E4 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC20.01■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms