Protein–RNA interactions for Protein: P04049

RAF1, RAF proto-oncogene serine/threonine-protein kinase, humanhuman

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAF1P04049 FP325331.1-202ENST00000623531 1380 ntBASIC19.19■□□□□ 0.66
RAF1P04049 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
RAF1P04049 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC19.19■□□□□ 0.66
RAF1P04049 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
RAF1P04049 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RAF1P04049 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
RAF1P04049 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC19.19■□□□□ 0.66
RAF1P04049 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC19.19■□□□□ 0.66
RAF1P04049 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC19.19■□□□□ 0.66
RAF1P04049 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RAF1P04049 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RAF1P04049 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC19.19■□□□□ 0.66
RAF1P04049 LINC01529-204ENST00000636474 1715 ntBASIC19.19■□□□□ 0.66
RAF1P04049 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RAF1P04049 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
RAF1P04049 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC19.19■□□□□ 0.66
RAF1P04049 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
RAF1P04049 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
RAF1P04049 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
RAF1P04049 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
RAF1P04049 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
RAF1P04049 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
RAF1P04049 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
RAF1P04049 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC19.18■□□□□ 0.66
RAF1P04049 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC19.18■□□□□ 0.66
RAF1P04049 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
RAF1P04049 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC19.18■□□□□ 0.66
RAF1P04049 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC19.18■□□□□ 0.66
RAF1P04049 KRT18P14-201ENST00000534205 1250 ntBASIC19.18■□□□□ 0.66
RAF1P04049 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
RAF1P04049 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC19.18■□□□□ 0.66
RAF1P04049 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
RAF1P04049 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC19.18■□□□□ 0.66
RAF1P04049 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
RAF1P04049 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC19.18■□□□□ 0.66
RAF1P04049 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
RAF1P04049 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
RAF1P04049 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
RAF1P04049 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
RAF1P04049 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC19.17■□□□□ 0.66
RAF1P04049 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
RAF1P04049 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
RAF1P04049 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC19.17■□□□□ 0.66
RAF1P04049 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC19.17■□□□□ 0.66
RAF1P04049 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
RAF1P04049 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC19.17■□□□□ 0.66
RAF1P04049 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
RAF1P04049 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
RAF1P04049 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
RAF1P04049 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
RAF1P04049 LINC02228-203ENST00000641970 1355 ntBASIC19.17■□□□□ 0.66
RAF1P04049 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC19.17■□□□□ 0.66
RAF1P04049 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC19.16■□□□□ 0.66
RAF1P04049 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
RAF1P04049 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
RAF1P04049 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
RAF1P04049 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC19.16■□□□□ 0.66
RAF1P04049 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
RAF1P04049 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC19.16■□□□□ 0.66
RAF1P04049 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC19.16■□□□□ 0.66
RAF1P04049 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC19.16■□□□□ 0.66
RAF1P04049 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC19.16■□□□□ 0.66
RAF1P04049 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
RAF1P04049 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
RAF1P04049 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC19.16■□□□□ 0.66
RAF1P04049 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
RAF1P04049 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
RAF1P04049 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
RAF1P04049 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
RAF1P04049 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
RAF1P04049 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
RAF1P04049 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
RAF1P04049 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
RAF1P04049 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC19.15■□□□□ 0.66
RAF1P04049 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
RAF1P04049 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
RAF1P04049 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
RAF1P04049 DENND3-207ENST00000518347 850 ntTSL 2 BASIC19.15■□□□□ 0.66
RAF1P04049 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC19.15■□□□□ 0.66
RAF1P04049 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
RAF1P04049 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
RAF1P04049 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
RAF1P04049 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
RAF1P04049 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
RAF1P04049 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
RAF1P04049 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC19.15■□□□□ 0.66
RAF1P04049 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
RAF1P04049 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC19.15■□□□□ 0.66
RAF1P04049 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
RAF1P04049 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC19.14■□□□□ 0.66
RAF1P04049 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
RAF1P04049 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
RAF1P04049 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC19.14■□□□□ 0.65
RAF1P04049 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
RAF1P04049 TERF1P2-201ENST00000583350 1212 ntBASIC19.14■□□□□ 0.65
RAF1P04049 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC19.14■□□□□ 0.65
RAF1P04049 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
RAF1P04049 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
RAF1P04049 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
RAF1P04049 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC19.14■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 18.6 ms