Protein–RNA interactions for Protein: P01906

HLA-DQA2, HLA class II histocompatibility antigen, DQ alpha 2 chain, humanhuman

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA2P01906 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC19.05■□□□□ 0.64
HLA-DQA2P01906 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
HLA-DQA2P01906 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
HLA-DQA2P01906 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
HLA-DQA2P01906 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC19.05■□□□□ 0.64
HLA-DQA2P01906 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
HLA-DQA2P01906 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
HLA-DQA2P01906 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC19.05■□□□□ 0.64
HLA-DQA2P01906 AC136469.2-201ENST00000623944 1028 ntBASIC19.05■□□□□ 0.64
HLA-DQA2P01906 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC19.05■□□□□ 0.64
HLA-DQA2P01906 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
HLA-DQA2P01906 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
HLA-DQA2P01906 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
HLA-DQA2P01906 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
HLA-DQA2P01906 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC19.05■□□□□ 0.64
HLA-DQA2P01906 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
HLA-DQA2P01906 OXCT2P1-201ENST00000447263 1535 ntBASIC19.05■□□□□ 0.64
HLA-DQA2P01906 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
HLA-DQA2P01906 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
HLA-DQA2P01906 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
HLA-DQA2P01906 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
HLA-DQA2P01906 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
HLA-DQA2P01906 AC104564.3-201ENST00000582367 638 ntBASIC19.04■□□□□ 0.64
HLA-DQA2P01906 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC19.04■□□□□ 0.64
HLA-DQA2P01906 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC19.04■□□□□ 0.64
HLA-DQA2P01906 AC011298.3-201ENST00000615796 283 ntBASIC19.04■□□□□ 0.64
HLA-DQA2P01906 SF1-220ENST00000626028 704 ntTSL 2 BASIC19.04■□□□□ 0.64
HLA-DQA2P01906 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
HLA-DQA2P01906 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
HLA-DQA2P01906 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
HLA-DQA2P01906 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
HLA-DQA2P01906 AC026471.6-201ENST00000622954 1905 ntBASIC19.04■□□□□ 0.64
HLA-DQA2P01906 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC19.04■□□□□ 0.64
HLA-DQA2P01906 TUB-203ENST00000534099 1759 ntTSL 2 BASIC19.04■□□□□ 0.64
HLA-DQA2P01906 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
HLA-DQA2P01906 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
HLA-DQA2P01906 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC19.03■□□□□ 0.64
HLA-DQA2P01906 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
HLA-DQA2P01906 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
HLA-DQA2P01906 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
HLA-DQA2P01906 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
HLA-DQA2P01906 AL136116.3-201ENST00000402907 1138 ntBASIC19.03■□□□□ 0.64
HLA-DQA2P01906 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC19.03■□□□□ 0.64
HLA-DQA2P01906 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC19.03■□□□□ 0.64
HLA-DQA2P01906 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
HLA-DQA2P01906 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC19.03■□□□□ 0.64
HLA-DQA2P01906 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
HLA-DQA2P01906 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
HLA-DQA2P01906 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
HLA-DQA2P01906 Z98882.1-201ENST00000622160 2253 ntBASIC19.02■□□□□ 0.64
HLA-DQA2P01906 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC19.02■□□□□ 0.64
HLA-DQA2P01906 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC19.02■□□□□ 0.64
HLA-DQA2P01906 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC19.02■□□□□ 0.64
HLA-DQA2P01906 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
HLA-DQA2P01906 SLC47A1P1-202ENST00000449666 945 ntBASIC19.02■□□□□ 0.64
HLA-DQA2P01906 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC19.02■□□□□ 0.64
HLA-DQA2P01906 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
HLA-DQA2P01906 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.63
HLA-DQA2P01906 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC19.02■□□□□ 0.63
HLA-DQA2P01906 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
HLA-DQA2P01906 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.63
HLA-DQA2P01906 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
HLA-DQA2P01906 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
HLA-DQA2P01906 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
HLA-DQA2P01906 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
HLA-DQA2P01906 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC19.01■□□□□ 0.63
HLA-DQA2P01906 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC19.01■□□□□ 0.63
HLA-DQA2P01906 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
HLA-DQA2P01906 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC19.01■□□□□ 0.63
HLA-DQA2P01906 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
HLA-DQA2P01906 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
HLA-DQA2P01906 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
HLA-DQA2P01906 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC19.01■□□□□ 0.63
HLA-DQA2P01906 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
HLA-DQA2P01906 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC19.01■□□□□ 0.63
HLA-DQA2P01906 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC19■□□□□ 0.63
HLA-DQA2P01906 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC19■□□□□ 0.63
HLA-DQA2P01906 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC19■□□□□ 0.63
HLA-DQA2P01906 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC19■□□□□ 0.63
HLA-DQA2P01906 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC19■□□□□ 0.63
HLA-DQA2P01906 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC19■□□□□ 0.63
HLA-DQA2P01906 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC19■□□□□ 0.63
HLA-DQA2P01906 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC19■□□□□ 0.63
HLA-DQA2P01906 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC19■□□□□ 0.63
HLA-DQA2P01906 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
HLA-DQA2P01906 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC19■□□□□ 0.63
HLA-DQA2P01906 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC19■□□□□ 0.63
HLA-DQA2P01906 AC005229.4-201ENST00000610085 2198 ntBASIC19■□□□□ 0.63
HLA-DQA2P01906 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
HLA-DQA2P01906 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC19■□□□□ 0.63
HLA-DQA2P01906 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC19■□□□□ 0.63
HLA-DQA2P01906 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC19■□□□□ 0.63
HLA-DQA2P01906 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC18.99■□□□□ 0.63
HLA-DQA2P01906 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
HLA-DQA2P01906 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC18.99■□□□□ 0.63
HLA-DQA2P01906 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
HLA-DQA2P01906 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC18.99■□□□□ 0.63
HLA-DQA2P01906 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
HLA-DQA2P01906 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC18.99■□□□□ 0.63
HLA-DQA2P01906 AL034346.1-201ENST00000568244 1277 ntBASIC18.99■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 16.5 ms