Protein–RNA interactions for Protein: P01730

CD4, T-cell surface glycoprotein CD4, humanhuman

Predictions only

Length 458 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD4P01730 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC23.6■■□□□ 1.37
CD4P01730 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC23.6■■□□□ 1.37
CD4P01730 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC23.6■■□□□ 1.37
CD4P01730 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC23.6■■□□□ 1.37
CD4P01730 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
CD4P01730 AC083880.1-201ENST00000608266 535 ntBASIC23.6■■□□□ 1.37
CD4P01730 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
CD4P01730 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC23.6■■□□□ 1.37
CD4P01730 MYC-209ENST00000641252 345 ntBASIC23.6■■□□□ 1.37
CD4P01730 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC23.6■■□□□ 1.37
CD4P01730 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
CD4P01730 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
CD4P01730 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
CD4P01730 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC23.59■■□□□ 1.37
CD4P01730 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC23.59■■□□□ 1.37
CD4P01730 RARRES2P4-201ENST00000514074 484 ntBASIC23.59■■□□□ 1.37
CD4P01730 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC23.59■■□□□ 1.37
CD4P01730 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC23.59■■□□□ 1.37
CD4P01730 AC069236.1-201ENST00000604339 616 ntBASIC23.59■■□□□ 1.37
CD4P01730 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC23.59■■□□□ 1.37
CD4P01730 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
CD4P01730 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
CD4P01730 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
CD4P01730 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC23.59■■□□□ 1.37
CD4P01730 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC23.59■■□□□ 1.37
CD4P01730 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
CD4P01730 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC23.58■■□□□ 1.37
CD4P01730 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC23.58■■□□□ 1.37
CD4P01730 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
CD4P01730 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC23.58■■□□□ 1.37
CD4P01730 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC23.58■■□□□ 1.37
CD4P01730 DUSP5P2-201ENST00000426873 1033 ntBASIC23.58■■□□□ 1.37
CD4P01730 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC23.58■■□□□ 1.37
CD4P01730 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC23.58■■□□□ 1.37
CD4P01730 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC23.58■■□□□ 1.37
CD4P01730 AC008694.1-202ENST00000636953 945 ntBASIC23.58■■□□□ 1.37
CD4P01730 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
CD4P01730 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC23.58■■□□□ 1.36
CD4P01730 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC23.58■■□□□ 1.36
CD4P01730 NFE2L3P1-201ENST00000588207 1959 ntBASIC23.58■■□□□ 1.36
CD4P01730 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC23.57■■□□□ 1.36
CD4P01730 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC23.57■■□□□ 1.36
CD4P01730 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC23.57■■□□□ 1.36
CD4P01730 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
CD4P01730 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC23.57■■□□□ 1.36
CD4P01730 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
CD4P01730 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC23.57■■□□□ 1.36
CD4P01730 ADM-205ENST00000528544 586 ntTSL 2 BASIC23.57■■□□□ 1.36
CD4P01730 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC23.57■■□□□ 1.36
CD4P01730 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC23.57■■□□□ 1.36
CD4P01730 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC23.57■■□□□ 1.36
CD4P01730 AL034346.1-201ENST00000568244 1277 ntBASIC23.57■■□□□ 1.36
CD4P01730 ARL16-209ENST00000573715 763 ntTSL 3 BASIC23.57■■□□□ 1.36
CD4P01730 ARL16-211ENST00000576135 694 ntTSL 3 BASIC23.57■■□□□ 1.36
CD4P01730 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
CD4P01730 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
CD4P01730 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC23.57■■□□□ 1.36
CD4P01730 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC23.57■■□□□ 1.36
CD4P01730 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
CD4P01730 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
CD4P01730 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC23.56■■□□□ 1.36
CD4P01730 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
CD4P01730 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
CD4P01730 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
CD4P01730 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
CD4P01730 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC23.56■■□□□ 1.36
CD4P01730 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC23.56■■□□□ 1.36
CD4P01730 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC23.56■■□□□ 1.36
CD4P01730 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC23.56■■□□□ 1.36
CD4P01730 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC23.56■■□□□ 1.36
CD4P01730 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
CD4P01730 BX276092.2-201ENST00000417668 665 ntBASIC23.56■■□□□ 1.36
CD4P01730 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC23.56■■□□□ 1.36
CD4P01730 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC23.56■■□□□ 1.36
CD4P01730 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC23.56■■□□□ 1.36
CD4P01730 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC23.56■■□□□ 1.36
CD4P01730 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC23.56■■□□□ 1.36
CD4P01730 OR7E47P-201ENST00000546390 1422 ntBASIC23.56■■□□□ 1.36
CD4P01730 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
CD4P01730 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC23.56■■□□□ 1.36
CD4P01730 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
CD4P01730 LINC00526-201ENST00000581067 1875 ntBASIC23.56■■□□□ 1.36
CD4P01730 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
CD4P01730 GCSHP5-201ENST00000443090 522 ntBASIC23.55■■□□□ 1.36
CD4P01730 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
CD4P01730 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC23.55■■□□□ 1.36
CD4P01730 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
CD4P01730 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC23.55■■□□□ 1.36
CD4P01730 AP006587.3-201ENST00000525742 1516 ntBASIC23.54■■□□□ 1.36
CD4P01730 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
CD4P01730 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC23.54■■□□□ 1.36
CD4P01730 RHEB-204ENST00000472642 900 ntTSL 3 BASIC23.54■■□□□ 1.36
CD4P01730 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC23.54■■□□□ 1.36
CD4P01730 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC23.54■■□□□ 1.36
CD4P01730 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC23.54■■□□□ 1.36
CD4P01730 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
CD4P01730 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
CD4P01730 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC23.54■■□□□ 1.36
CD4P01730 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
CD4P01730 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
Retrieved 100 of 98,524 protein–RNA pairs in 59.8 ms