Protein–RNA interactions for Protein: O95219

SNX4, Sorting nexin-4, humanhuman

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX4O95219 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC19.89■□□□□ 0.77
SNX4O95219 MIR6821-201ENST00000617625 74 ntBASIC19.89■□□□□ 0.77
SNX4O95219 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
SNX4O95219 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SNX4O95219 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
SNX4O95219 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC19.88■□□□□ 0.77
SNX4O95219 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SNX4O95219 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
SNX4O95219 AC027612.3-201ENST00000413684 1047 ntBASIC19.88■□□□□ 0.77
SNX4O95219 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC19.88■□□□□ 0.77
SNX4O95219 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SNX4O95219 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
SNX4O95219 SP2-202ENST00000613139 908 ntTSL 5 BASIC19.88■□□□□ 0.77
SNX4O95219 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
SNX4O95219 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
SNX4O95219 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
SNX4O95219 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC19.88■□□□□ 0.77
SNX4O95219 AC092667.1-201ENST00000434301 2586 ntBASIC19.88■□□□□ 0.77
SNX4O95219 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC19.87■□□□□ 0.77
SNX4O95219 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
SNX4O95219 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC19.87■□□□□ 0.77
SNX4O95219 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
SNX4O95219 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC19.87■□□□□ 0.77
SNX4O95219 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC19.87■□□□□ 0.77
SNX4O95219 AC026271.2-201ENST00000428091 497 ntBASIC19.87■□□□□ 0.77
SNX4O95219 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
SNX4O95219 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
SNX4O95219 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
SNX4O95219 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
SNX4O95219 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
SNX4O95219 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SNX4O95219 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SNX4O95219 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SNX4O95219 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC19.86■□□□□ 0.77
SNX4O95219 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
SNX4O95219 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
SNX4O95219 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SNX4O95219 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SNX4O95219 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SNX4O95219 YBX1P1-201ENST00000445822 960 ntBASIC19.86■□□□□ 0.77
SNX4O95219 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC19.86■□□□□ 0.77
SNX4O95219 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
SNX4O95219 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC19.86■□□□□ 0.77
SNX4O95219 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC19.86■□□□□ 0.77
SNX4O95219 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
SNX4O95219 C11orf96-202ENST00000528572 1834 ntBASIC19.86■□□□□ 0.77
SNX4O95219 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SNX4O95219 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC19.85■□□□□ 0.77
SNX4O95219 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SNX4O95219 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC19.85■□□□□ 0.77
SNX4O95219 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
SNX4O95219 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SNX4O95219 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC19.85■□□□□ 0.77
SNX4O95219 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
SNX4O95219 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
SNX4O95219 AC123595.1-201ENST00000440769 1046 ntBASIC19.85■□□□□ 0.77
SNX4O95219 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC19.85■□□□□ 0.77
SNX4O95219 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC19.85■□□□□ 0.77
SNX4O95219 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC19.85■□□□□ 0.77
SNX4O95219 MIR5787-201ENST00000611784 55 ntBASIC19.85■□□□□ 0.77
SNX4O95219 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SNX4O95219 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SNX4O95219 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SNX4O95219 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC19.85■□□□□ 0.77
SNX4O95219 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC19.85■□□□□ 0.77
SNX4O95219 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC19.85■□□□□ 0.77
SNX4O95219 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
SNX4O95219 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SNX4O95219 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SNX4O95219 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SNX4O95219 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
SNX4O95219 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC19.84■□□□□ 0.77
SNX4O95219 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
SNX4O95219 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SNX4O95219 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC19.84■□□□□ 0.77
SNX4O95219 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
SNX4O95219 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC19.84■□□□□ 0.77
SNX4O95219 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC19.84■□□□□ 0.77
SNX4O95219 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SNX4O95219 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
SNX4O95219 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
SNX4O95219 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SNX4O95219 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
SNX4O95219 PALM-208ENST00000592155 2272 ntTSL 4 BASIC19.83■□□□□ 0.77
SNX4O95219 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC19.83■□□□□ 0.77
SNX4O95219 FBXW4P1-201ENST00000426721 2239 ntBASIC19.83■□□□□ 0.77
SNX4O95219 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.77
SNX4O95219 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC19.83■□□□□ 0.77
SNX4O95219 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC19.83■□□□□ 0.77
SNX4O95219 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC19.83■□□□□ 0.77
SNX4O95219 SMUG1P1-201ENST00000590640 811 ntBASIC19.83■□□□□ 0.77
SNX4O95219 MIR6084-201ENST00000622012 110 ntBASIC19.83■□□□□ 0.77
SNX4O95219 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
SNX4O95219 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
SNX4O95219 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
SNX4O95219 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
SNX4O95219 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
SNX4O95219 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
SNX4O95219 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
SNX4O95219 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms