Protein–RNA interactions for Protein: O94993

SOX30, Transcription factor SOX-30, humanhuman

Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX30O94993 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
SOX30O94993 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC19.77■□□□□ 0.76
SOX30O94993 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
SOX30O94993 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
SOX30O94993 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
SOX30O94993 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC19.77■□□□□ 0.76
SOX30O94993 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
SOX30O94993 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
SOX30O94993 AL358852.1-201ENST00000623174 1268 ntBASIC19.77■□□□□ 0.76
SOX30O94993 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
SOX30O94993 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
SOX30O94993 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
SOX30O94993 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SOX30O94993 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SOX30O94993 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
SOX30O94993 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC19.76■□□□□ 0.75
SOX30O94993 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC19.76■□□□□ 0.75
SOX30O94993 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC19.76■□□□□ 0.75
SOX30O94993 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC19.76■□□□□ 0.75
SOX30O94993 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC19.76■□□□□ 0.75
SOX30O94993 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
SOX30O94993 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC19.76■□□□□ 0.75
SOX30O94993 AC012414.1-201ENST00000556676 535 ntBASIC19.76■□□□□ 0.75
SOX30O94993 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
SOX30O94993 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
SOX30O94993 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
SOX30O94993 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SOX30O94993 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
SOX30O94993 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC19.75■□□□□ 0.75
SOX30O94993 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC19.75■□□□□ 0.75
SOX30O94993 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SOX30O94993 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
SOX30O94993 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
SOX30O94993 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SOX30O94993 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC19.75■□□□□ 0.75
SOX30O94993 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC19.75■□□□□ 0.75
SOX30O94993 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SOX30O94993 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC19.75■□□□□ 0.75
SOX30O94993 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
SOX30O94993 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
SOX30O94993 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC19.75■□□□□ 0.75
SOX30O94993 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC19.75■□□□□ 0.75
SOX30O94993 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SOX30O94993 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC19.74■□□□□ 0.75
SOX30O94993 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC19.74■□□□□ 0.75
SOX30O94993 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
SOX30O94993 MFF-203ENST00000349901 1716 ntTSL 2 BASIC19.74■□□□□ 0.75
SOX30O94993 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SOX30O94993 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC19.74■□□□□ 0.75
SOX30O94993 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
SOX30O94993 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC19.74■□□□□ 0.75
SOX30O94993 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC19.74■□□□□ 0.75
SOX30O94993 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC19.74■□□□□ 0.75
SOX30O94993 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC19.74■□□□□ 0.75
SOX30O94993 AC003102.1-202ENST00000563394 1796 ntBASIC19.74■□□□□ 0.75
SOX30O94993 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
SOX30O94993 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
SOX30O94993 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
SOX30O94993 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
SOX30O94993 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
SOX30O94993 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
SOX30O94993 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC19.73■□□□□ 0.75
SOX30O94993 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC19.73■□□□□ 0.75
SOX30O94993 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SOX30O94993 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
SOX30O94993 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
SOX30O94993 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC19.73■□□□□ 0.75
SOX30O94993 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SOX30O94993 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC19.73■□□□□ 0.75
SOX30O94993 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC19.73■□□□□ 0.75
SOX30O94993 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SOX30O94993 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC19.73■□□□□ 0.75
SOX30O94993 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC19.73■□□□□ 0.75
SOX30O94993 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
SOX30O94993 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
SOX30O94993 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC19.72■□□□□ 0.75
SOX30O94993 AC005224.4-201ENST00000583262 1652 ntBASIC19.72■□□□□ 0.75
SOX30O94993 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
SOX30O94993 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
SOX30O94993 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
SOX30O94993 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SOX30O94993 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
SOX30O94993 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC19.72■□□□□ 0.75
SOX30O94993 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
SOX30O94993 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
SOX30O94993 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
SOX30O94993 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
SOX30O94993 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC19.72■□□□□ 0.75
SOX30O94993 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SOX30O94993 AC055733.4-201ENST00000638462 1354 ntBASIC19.71■□□□□ 0.75
SOX30O94993 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SOX30O94993 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SOX30O94993 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
SOX30O94993 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
SOX30O94993 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
SOX30O94993 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC19.71■□□□□ 0.75
SOX30O94993 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
SOX30O94993 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC19.71■□□□□ 0.75
SOX30O94993 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC19.71■□□□□ 0.75
SOX30O94993 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 17.1 ms