Protein–RNA interactions for Protein: O94913

PCF11, Pre-mRNA cleavage complex 2 protein Pcf11, humanhuman

Known RBP Predictions only

Length 1,555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11O94913 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC33.47■■■□□ 2.95
PCF11O94913 AC069152.1-201ENST00000438030 544 ntBASIC33.47■■■□□ 2.95
PCF11O94913 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC33.47■■■□□ 2.95
PCF11O94913 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC33.47■■■□□ 2.95
PCF11O94913 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC33.47■■■□□ 2.95
PCF11O94913 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC33.47■■■□□ 2.95
PCF11O94913 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC33.47■■■□□ 2.95
PCF11O94913 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC33.47■■■□□ 2.95
PCF11O94913 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC33.47■■■□□ 2.95
PCF11O94913 LTK-203ENST00000453182 2412 ntTSL 2 BASIC33.47■■■□□ 2.95
PCF11O94913 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC33.47■■■□□ 2.95
PCF11O94913 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC33.47■■■□□ 2.95
PCF11O94913 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC33.46■■■□□ 2.95
PCF11O94913 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC33.46■■■□□ 2.95
PCF11O94913 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC33.46■■■□□ 2.95
PCF11O94913 SLC29A4P1-201ENST00000398760 971 ntBASIC33.46■■■□□ 2.95
PCF11O94913 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC33.46■■■□□ 2.95
PCF11O94913 AF201337.1-201ENST00000520239 748 ntBASIC33.46■■■□□ 2.95
PCF11O94913 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC33.46■■■□□ 2.95
PCF11O94913 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC33.46■■■□□ 2.95
PCF11O94913 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC33.46■■■□□ 2.95
PCF11O94913 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC33.46■■■□□ 2.95
PCF11O94913 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC33.46■■■□□ 2.95
PCF11O94913 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC33.46■■■□□ 2.95
PCF11O94913 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC33.46■■■□□ 2.95
PCF11O94913 AC127496.7-201ENST00000625110 1798 ntBASIC33.45■■■□□ 2.94
PCF11O94913 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC33.45■■■□□ 2.94
PCF11O94913 PKM-204ENST00000449901 2526 ntTSL 2 BASIC33.45■■■□□ 2.94
PCF11O94913 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC33.45■■■□□ 2.94
PCF11O94913 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC33.44■■■□□ 2.94
PCF11O94913 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC33.44■■■□□ 2.94
PCF11O94913 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC33.44■■■□□ 2.94
PCF11O94913 PHB2-213ENST00000546111 858 ntTSL 2 BASIC33.44■■■□□ 2.94
PCF11O94913 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC33.44■■■□□ 2.94
PCF11O94913 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC33.44■■■□□ 2.94
PCF11O94913 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC33.44■■■□□ 2.94
PCF11O94913 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC33.43■■■□□ 2.94
PCF11O94913 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC33.43■■■□□ 2.94
PCF11O94913 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC33.43■■■□□ 2.94
PCF11O94913 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC33.43■■■□□ 2.94
PCF11O94913 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC33.43■■■□□ 2.94
PCF11O94913 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC33.43■■■□□ 2.94
PCF11O94913 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC33.43■■■□□ 2.94
PCF11O94913 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC33.43■■■□□ 2.94
PCF11O94913 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC33.43■■■□□ 2.94
PCF11O94913 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC33.43■■■□□ 2.94
PCF11O94913 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC33.43■■■□□ 2.94
PCF11O94913 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC33.43■■■□□ 2.94
PCF11O94913 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC33.43■■■□□ 2.94
PCF11O94913 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC33.43■■■□□ 2.94
PCF11O94913 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC33.43■■■□□ 2.94
PCF11O94913 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC33.42■■■□□ 2.94
PCF11O94913 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC33.42■■■□□ 2.94
PCF11O94913 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC33.42■■■□□ 2.94
PCF11O94913 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC33.42■■■□□ 2.94
PCF11O94913 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC33.42■■■□□ 2.94
PCF11O94913 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC33.42■■■□□ 2.94
PCF11O94913 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC33.42■■■□□ 2.94
PCF11O94913 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC33.42■■■□□ 2.94
PCF11O94913 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC33.42■■■□□ 2.94
PCF11O94913 BMP1-204ENST00000397814 836 ntTSL 4 BASIC33.42■■■□□ 2.94
PCF11O94913 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC33.42■■■□□ 2.94
PCF11O94913 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC33.42■■■□□ 2.94
PCF11O94913 AC016405.3-201ENST00000607710 860 ntBASIC33.42■■■□□ 2.94
PCF11O94913 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC33.42■■■□□ 2.94
PCF11O94913 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC33.42■■■□□ 2.94
PCF11O94913 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC33.41■■■□□ 2.94
PCF11O94913 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC33.41■■■□□ 2.94
PCF11O94913 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC33.41■■■□□ 2.94
PCF11O94913 AC080038.3-201ENST00000623346 1952 ntBASIC33.41■■■□□ 2.94
PCF11O94913 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC33.41■■■□□ 2.94
PCF11O94913 AC093787.1-201ENST00000450396 207 ntBASIC33.41■■■□□ 2.94
PCF11O94913 TERF1P5-201ENST00000477545 1207 ntBASIC33.41■■■□□ 2.94
PCF11O94913 KLF13-207ENST00000560473 489 ntTSL 3 BASIC33.41■■■□□ 2.94
PCF11O94913 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC33.41■■■□□ 2.94
PCF11O94913 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC33.41■■■□□ 2.94
PCF11O94913 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC33.4■■■□□ 2.94
PCF11O94913 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC33.4■■■□□ 2.94
PCF11O94913 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC33.4■■■□□ 2.94
PCF11O94913 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC33.4■■■□□ 2.94
PCF11O94913 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC33.4■■■□□ 2.94
PCF11O94913 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC33.4■■■□□ 2.94
PCF11O94913 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC33.4■■■□□ 2.94
PCF11O94913 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC33.4■■■□□ 2.94
PCF11O94913 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC33.4■■■□□ 2.94
PCF11O94913 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC33.4■■■□□ 2.94
PCF11O94913 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC33.4■■■□□ 2.94
PCF11O94913 KRT16P2-201ENST00000414673 1423 ntBASIC33.4■■■□□ 2.94
PCF11O94913 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC33.4■■■□□ 2.94
PCF11O94913 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC33.4■■■□□ 2.94
PCF11O94913 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC33.4■■■□□ 2.94
PCF11O94913 AC105036.2-201ENST00000569468 176 ntBASIC33.39■■■□□ 2.94
PCF11O94913 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC33.38■■■□□ 2.93
PCF11O94913 RBM17P2-201ENST00000616397 1405 ntBASIC33.38■■■□□ 2.93
PCF11O94913 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC33.38■■■□□ 2.93
PCF11O94913 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC33.38■■■□□ 2.93
PCF11O94913 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC33.38■■■□□ 2.93
PCF11O94913 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC33.38■■■□□ 2.93
PCF11O94913 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC33.38■■■□□ 2.93
PCF11O94913 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC33.38■■■□□ 2.93
Retrieved 100 of 98,524 protein–RNA pairs in 20 ms