Protein–RNA interactions for Protein: O60391

GRIN3B, Glutamate receptor ionotropic, NMDA 3B, humanhuman

Predictions only

Length 1,043 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GRIN3BO60391 AL590326.2-201ENST00000625139 305 ntBASIC26.32■■□□□ 1.8
GRIN3BO60391 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
GRIN3BO60391 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC26.31■■□□□ 1.8
GRIN3BO60391 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
GRIN3BO60391 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC26.31■■□□□ 1.8
GRIN3BO60391 AC053503.5-201ENST00000601508 636 ntBASIC26.31■■□□□ 1.8
GRIN3BO60391 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC26.31■■□□□ 1.8
GRIN3BO60391 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
GRIN3BO60391 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC26.3■■□□□ 1.8
GRIN3BO60391 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC26.3■■□□□ 1.8
GRIN3BO60391 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
GRIN3BO60391 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC26.3■■□□□ 1.8
GRIN3BO60391 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC26.3■■□□□ 1.8
GRIN3BO60391 TPM1-226ENST00000560959 925 ntTSL 2 BASIC26.3■■□□□ 1.8
GRIN3BO60391 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC26.3■■□□□ 1.8
GRIN3BO60391 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
GRIN3BO60391 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
GRIN3BO60391 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC26.3■■□□□ 1.8
GRIN3BO60391 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC26.29■■□□□ 1.8
GRIN3BO60391 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
GRIN3BO60391 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
GRIN3BO60391 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
GRIN3BO60391 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC26.29■■□□□ 1.8
GRIN3BO60391 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC26.29■■□□□ 1.8
GRIN3BO60391 AP001412.1-201ENST00000608405 714 ntBASIC26.29■■□□□ 1.8
GRIN3BO60391 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC26.29■■□□□ 1.8
GRIN3BO60391 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
GRIN3BO60391 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
GRIN3BO60391 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC26.29■■□□□ 1.8
GRIN3BO60391 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC26.29■■□□□ 1.8
GRIN3BO60391 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC26.29■■□□□ 1.8
GRIN3BO60391 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
GRIN3BO60391 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC26.28■■□□□ 1.8
GRIN3BO60391 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
GRIN3BO60391 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
GRIN3BO60391 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC26.28■■□□□ 1.8
GRIN3BO60391 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
GRIN3BO60391 DHDH-203ENST00000522614 776 ntTSL 5 BASIC26.28■■□□□ 1.8
GRIN3BO60391 MIR4785-201ENST00000585005 73 ntBASIC26.28■■□□□ 1.8
GRIN3BO60391 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC26.28■■□□□ 1.8
GRIN3BO60391 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
GRIN3BO60391 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
GRIN3BO60391 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC26.27■■□□□ 1.8
GRIN3BO60391 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
GRIN3BO60391 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
GRIN3BO60391 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC26.27■■□□□ 1.8
GRIN3BO60391 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
GRIN3BO60391 PRKY-204ENST00000533551 1019 ntBASIC26.27■■□□□ 1.8
GRIN3BO60391 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
GRIN3BO60391 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC26.27■■□□□ 1.8
GRIN3BO60391 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC26.27■■□□□ 1.8
GRIN3BO60391 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC26.27■■□□□ 1.8
GRIN3BO60391 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
GRIN3BO60391 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC26.27■■□□□ 1.8
GRIN3BO60391 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC26.27■■□□□ 1.8
GRIN3BO60391 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC26.27■■□□□ 1.8
GRIN3BO60391 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
GRIN3BO60391 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC26.27■■□□□ 1.8
GRIN3BO60391 CREM-210ENST00000374721 2020 ntTSL 5 BASIC26.27■■□□□ 1.8
GRIN3BO60391 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
GRIN3BO60391 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC26.26■■□□□ 1.79
GRIN3BO60391 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC26.26■■□□□ 1.79
GRIN3BO60391 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
GRIN3BO60391 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
GRIN3BO60391 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC26.26■■□□□ 1.79
GRIN3BO60391 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC26.26■■□□□ 1.79
GRIN3BO60391 PNMA6B-201ENST00000538162 1200 ntBASIC26.26■■□□□ 1.79
GRIN3BO60391 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC26.26■■□□□ 1.79
GRIN3BO60391 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
GRIN3BO60391 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
GRIN3BO60391 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
GRIN3BO60391 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
GRIN3BO60391 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
GRIN3BO60391 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC26.25■■□□□ 1.79
GRIN3BO60391 REXO2-216ENST00000544196 452 ntTSL 3 BASIC26.25■■□□□ 1.79
GRIN3BO60391 AC233263.1-201ENST00000578059 224 ntBASIC26.25■■□□□ 1.79
GRIN3BO60391 RN7SL850P-201ENST00000579959 291 ntBASIC26.25■■□□□ 1.79
GRIN3BO60391 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC26.25■■□□□ 1.79
GRIN3BO60391 AC069544.1-201ENST00000609399 999 ntBASIC26.25■■□□□ 1.79
GRIN3BO60391 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC26.25■■□□□ 1.79
GRIN3BO60391 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC26.25■■□□□ 1.79
GRIN3BO60391 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC26.25■■□□□ 1.79
GRIN3BO60391 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
GRIN3BO60391 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC26.24■■□□□ 1.79
GRIN3BO60391 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC26.24■■□□□ 1.79
GRIN3BO60391 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC26.24■■□□□ 1.79
GRIN3BO60391 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC26.24■■□□□ 1.79
GRIN3BO60391 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC26.24■■□□□ 1.79
GRIN3BO60391 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC26.24■■□□□ 1.79
GRIN3BO60391 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC26.24■■□□□ 1.79
GRIN3BO60391 RMI2-205ENST00000576027 818 ntTSL 2 BASIC26.24■■□□□ 1.79
GRIN3BO60391 BRWD1-AS2-201ENST00000603064 1028 ntBASIC26.24■■□□□ 1.79
GRIN3BO60391 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC26.24■■□□□ 1.79
GRIN3BO60391 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
GRIN3BO60391 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC26.24■■□□□ 1.79
GRIN3BO60391 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC26.24■■□□□ 1.79
GRIN3BO60391 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
GRIN3BO60391 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
GRIN3BO60391 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
GRIN3BO60391 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
Retrieved 100 of 98,524 protein–RNA pairs in 16.5 ms