Protein–RNA interactions for Protein: O60232

SSSCA1, Sjoegren syndrome/scleroderma autoantigen 1, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1O60232 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC17.3■□□□□ 0.36
SSSCA1O60232 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC17.3■□□□□ 0.36
SSSCA1O60232 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SSSCA1O60232 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SSSCA1O60232 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SSSCA1O60232 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC17.3■□□□□ 0.36
SSSCA1O60232 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SSSCA1O60232 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC17.3■□□□□ 0.36
SSSCA1O60232 CLTA-210ENST00000540080 989 ntTSL 2 BASIC17.3■□□□□ 0.36
SSSCA1O60232 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC17.3■□□□□ 0.36
SSSCA1O60232 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
SSSCA1O60232 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
SSSCA1O60232 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SSSCA1O60232 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SSSCA1O60232 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SSSCA1O60232 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
SSSCA1O60232 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
SSSCA1O60232 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SSSCA1O60232 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC17.29■□□□□ 0.36
SSSCA1O60232 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC17.29■□□□□ 0.36
SSSCA1O60232 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SSSCA1O60232 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
SSSCA1O60232 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
SSSCA1O60232 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
SSSCA1O60232 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
SSSCA1O60232 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
SSSCA1O60232 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SSSCA1O60232 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SSSCA1O60232 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
SSSCA1O60232 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SSSCA1O60232 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC17.29■□□□□ 0.36
SSSCA1O60232 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SSSCA1O60232 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC17.29■□□□□ 0.36
SSSCA1O60232 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SSSCA1O60232 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC17.29■□□□□ 0.36
SSSCA1O60232 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SSSCA1O60232 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC17.29■□□□□ 0.36
SSSCA1O60232 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
SSSCA1O60232 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SSSCA1O60232 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SSSCA1O60232 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
SSSCA1O60232 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
SSSCA1O60232 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
SSSCA1O60232 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SSSCA1O60232 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SSSCA1O60232 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SSSCA1O60232 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC17.28■□□□□ 0.36
SSSCA1O60232 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
SSSCA1O60232 NTF6A-201ENST00000591175 560 ntBASIC17.28■□□□□ 0.36
SSSCA1O60232 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC17.28■□□□□ 0.36
SSSCA1O60232 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC17.28■□□□□ 0.36
SSSCA1O60232 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
SSSCA1O60232 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC17.28■□□□□ 0.36
SSSCA1O60232 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SSSCA1O60232 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC17.28■□□□□ 0.36
SSSCA1O60232 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
SSSCA1O60232 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
SSSCA1O60232 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
SSSCA1O60232 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
SSSCA1O60232 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC17.27■□□□□ 0.36
SSSCA1O60232 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
SSSCA1O60232 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
SSSCA1O60232 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
SSSCA1O60232 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
SSSCA1O60232 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
SSSCA1O60232 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC17.27■□□□□ 0.36
SSSCA1O60232 AC004987.1-201ENST00000428627 508 ntBASIC17.27■□□□□ 0.36
SSSCA1O60232 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC17.27■□□□□ 0.36
SSSCA1O60232 ATP5G2P3-201ENST00000429083 425 ntBASIC17.27■□□□□ 0.36
SSSCA1O60232 AC009102.2-201ENST00000606772 1639 ntBASIC17.27■□□□□ 0.36
SSSCA1O60232 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
SSSCA1O60232 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.35
SSSCA1O60232 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC17.27■□□□□ 0.35
SSSCA1O60232 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
SSSCA1O60232 C17orf82-201ENST00000623772 1530 ntBASIC17.26■□□□□ 0.35
SSSCA1O60232 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SSSCA1O60232 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC17.26■□□□□ 0.35
SSSCA1O60232 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SSSCA1O60232 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SSSCA1O60232 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SSSCA1O60232 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SSSCA1O60232 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
SSSCA1O60232 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC17.26■□□□□ 0.35
SSSCA1O60232 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
SSSCA1O60232 MIR4508-201ENST00000584178 70 ntBASIC17.26■□□□□ 0.35
SSSCA1O60232 HSD17B1P1-201ENST00000590052 955 ntBASIC17.26■□□□□ 0.35
SSSCA1O60232 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
SSSCA1O60232 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SSSCA1O60232 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC17.26■□□□□ 0.35
SSSCA1O60232 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC17.26■□□□□ 0.35
SSSCA1O60232 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SSSCA1O60232 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SSSCA1O60232 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SSSCA1O60232 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC17.25■□□□□ 0.35
SSSCA1O60232 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SSSCA1O60232 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SSSCA1O60232 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
SSSCA1O60232 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
SSSCA1O60232 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SSSCA1O60232 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms