Protein–RNA interactions for Protein: O43924

PDE6D, Retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit delta, humanhuman

Predictions only

Length 150 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6DO43924 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC16.49■□□□□ 0.23
PDE6DO43924 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
PDE6DO43924 AP005212.1-201ENST00000581547 1997 ntBASIC16.48■□□□□ 0.23
PDE6DO43924 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PDE6DO43924 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PDE6DO43924 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
PDE6DO43924 DUX4L4-201ENST00000566884 1269 ntBASIC16.48■□□□□ 0.23
PDE6DO43924 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC16.48■□□□□ 0.23
PDE6DO43924 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
PDE6DO43924 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PDE6DO43924 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC16.48■□□□□ 0.23
PDE6DO43924 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC16.48■□□□□ 0.23
PDE6DO43924 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
PDE6DO43924 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
PDE6DO43924 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PDE6DO43924 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
PDE6DO43924 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PDE6DO43924 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC16.47■□□□□ 0.23
PDE6DO43924 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
PDE6DO43924 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
PDE6DO43924 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC16.47■□□□□ 0.23
PDE6DO43924 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PDE6DO43924 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC16.47■□□□□ 0.23
PDE6DO43924 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
PDE6DO43924 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC16.47■□□□□ 0.23
PDE6DO43924 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PDE6DO43924 AL391422.3-201ENST00000603791 2761 ntBASIC16.47■□□□□ 0.23
PDE6DO43924 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PDE6DO43924 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
PDE6DO43924 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
PDE6DO43924 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
PDE6DO43924 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
PDE6DO43924 DYM-203ENST00000442713 2147 ntTSL 2 BASIC16.46■□□□□ 0.23
PDE6DO43924 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC16.46■□□□□ 0.23
PDE6DO43924 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC16.46■□□□□ 0.23
PDE6DO43924 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PDE6DO43924 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
PDE6DO43924 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC16.46■□□□□ 0.23
PDE6DO43924 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
PDE6DO43924 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
PDE6DO43924 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC16.46■□□□□ 0.23
PDE6DO43924 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
PDE6DO43924 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
PDE6DO43924 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PDE6DO43924 PARN-205ENST00000539279 1557 ntTSL 2 BASIC16.46■□□□□ 0.23
PDE6DO43924 ME2-216ENST00000639850 2331 ntTSL 5 BASIC16.46■□□□□ 0.23
PDE6DO43924 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PDE6DO43924 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC16.46■□□□□ 0.23
PDE6DO43924 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC16.46■□□□□ 0.22
PDE6DO43924 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC16.46■□□□□ 0.22
PDE6DO43924 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.22
PDE6DO43924 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC16.46■□□□□ 0.22
PDE6DO43924 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC16.46■□□□□ 0.22
PDE6DO43924 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
PDE6DO43924 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC16.45■□□□□ 0.22
PDE6DO43924 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
PDE6DO43924 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
PDE6DO43924 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
PDE6DO43924 AC004687.1-201ENST00000579003 1625 ntBASIC16.45■□□□□ 0.22
PDE6DO43924 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PDE6DO43924 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC16.45■□□□□ 0.22
PDE6DO43924 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC16.45■□□□□ 0.22
PDE6DO43924 AL592293.1-201ENST00000502889 1188 ntBASIC16.45■□□□□ 0.22
PDE6DO43924 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC16.45■□□□□ 0.22
PDE6DO43924 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC16.45■□□□□ 0.22
PDE6DO43924 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PDE6DO43924 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC16.45■□□□□ 0.22
PDE6DO43924 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC16.45■□□□□ 0.22
PDE6DO43924 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC16.45■□□□□ 0.22
PDE6DO43924 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PDE6DO43924 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PDE6DO43924 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PDE6DO43924 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC16.45■□□□□ 0.22
PDE6DO43924 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
PDE6DO43924 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC16.45■□□□□ 0.22
PDE6DO43924 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC16.45■□□□□ 0.22
PDE6DO43924 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC16.44■□□□□ 0.22
PDE6DO43924 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
PDE6DO43924 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
PDE6DO43924 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC16.44■□□□□ 0.22
PDE6DO43924 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC16.44■□□□□ 0.22
PDE6DO43924 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC16.44■□□□□ 0.22
PDE6DO43924 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
PDE6DO43924 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC16.44■□□□□ 0.22
PDE6DO43924 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
PDE6DO43924 ABHD17AP4-201ENST00000411545 909 ntBASIC16.44■□□□□ 0.22
PDE6DO43924 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
PDE6DO43924 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
PDE6DO43924 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC16.44■□□□□ 0.22
PDE6DO43924 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC16.44■□□□□ 0.22
PDE6DO43924 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
PDE6DO43924 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC16.44■□□□□ 0.22
PDE6DO43924 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC16.44■□□□□ 0.22
PDE6DO43924 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC16.44■□□□□ 0.22
PDE6DO43924 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
PDE6DO43924 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC16.44■□□□□ 0.22
PDE6DO43924 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
PDE6DO43924 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC16.43■□□□□ 0.22
PDE6DO43924 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
PDE6DO43924 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms