Protein–RNA interactions for Protein: O14917

PCDH17, Protocadherin-17, humanhuman

Predictions only

Length 1,159 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH17O14917 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
PCDH17O14917 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
PCDH17O14917 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC20.28■□□□□ 0.84
PCDH17O14917 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
PCDH17O14917 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
PCDH17O14917 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC20.28■□□□□ 0.84
PCDH17O14917 CPT2-209ENST00000636935 803 ntTSL 5 BASIC20.28■□□□□ 0.84
PCDH17O14917 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
PCDH17O14917 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
PCDH17O14917 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC20.28■□□□□ 0.84
PCDH17O14917 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC20.28■□□□□ 0.84
PCDH17O14917 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
PCDH17O14917 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
PCDH17O14917 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
PCDH17O14917 AC079089.2-201ENST00000531211 1277 ntBASIC20.27■□□□□ 0.84
PCDH17O14917 AC022517.1-201ENST00000592429 346 ntBASIC20.27■□□□□ 0.84
PCDH17O14917 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
PCDH17O14917 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
PCDH17O14917 AL024507.2-201ENST00000606070 2574 ntBASIC20.27■□□□□ 0.83
PCDH17O14917 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
PCDH17O14917 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PCDH17O14917 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC20.26■□□□□ 0.83
PCDH17O14917 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
PCDH17O14917 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PCDH17O14917 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PCDH17O14917 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC20.26■□□□□ 0.83
PCDH17O14917 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC20.26■□□□□ 0.83
PCDH17O14917 NTF6G-201ENST00000591094 616 ntBASIC20.26■□□□□ 0.83
PCDH17O14917 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
PCDH17O14917 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC20.26■□□□□ 0.83
PCDH17O14917 RARRES2P11-201ENST00000635158 484 ntBASIC20.26■□□□□ 0.83
PCDH17O14917 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC20.26■□□□□ 0.83
PCDH17O14917 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PCDH17O14917 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC20.26■□□□□ 0.83
PCDH17O14917 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC20.25■□□□□ 0.83
PCDH17O14917 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC20.25■□□□□ 0.83
PCDH17O14917 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PCDH17O14917 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC20.25■□□□□ 0.83
PCDH17O14917 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC20.25■□□□□ 0.83
PCDH17O14917 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
PCDH17O14917 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
PCDH17O14917 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC20.25■□□□□ 0.83
PCDH17O14917 AC090192.1-201ENST00000517740 490 ntBASIC20.25■□□□□ 0.83
PCDH17O14917 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC20.25■□□□□ 0.83
PCDH17O14917 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PCDH17O14917 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
PCDH17O14917 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC20.24■□□□□ 0.83
PCDH17O14917 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
PCDH17O14917 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
PCDH17O14917 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC20.24■□□□□ 0.83
PCDH17O14917 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC20.24■□□□□ 0.83
PCDH17O14917 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC20.24■□□□□ 0.83
PCDH17O14917 IKBKGP1-201ENST00000612193 1073 ntBASIC20.24■□□□□ 0.83
PCDH17O14917 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC20.24■□□□□ 0.83
PCDH17O14917 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC20.24■□□□□ 0.83
PCDH17O14917 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC20.23■□□□□ 0.83
PCDH17O14917 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC20.23■□□□□ 0.83
PCDH17O14917 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
PCDH17O14917 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
PCDH17O14917 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
PCDH17O14917 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
PCDH17O14917 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC20.23■□□□□ 0.83
PCDH17O14917 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
PCDH17O14917 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
PCDH17O14917 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC20.23■□□□□ 0.83
PCDH17O14917 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
PCDH17O14917 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC20.23■□□□□ 0.83
PCDH17O14917 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC20.23■□□□□ 0.83
PCDH17O14917 AL034346.1-201ENST00000568244 1277 ntBASIC20.23■□□□□ 0.83
PCDH17O14917 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
PCDH17O14917 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC20.23■□□□□ 0.83
PCDH17O14917 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC20.23■□□□□ 0.83
PCDH17O14917 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
PCDH17O14917 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
PCDH17O14917 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
PCDH17O14917 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC20.22■□□□□ 0.83
PCDH17O14917 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
PCDH17O14917 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
PCDH17O14917 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
PCDH17O14917 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC20.22■□□□□ 0.83
PCDH17O14917 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
PCDH17O14917 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC20.22■□□□□ 0.83
PCDH17O14917 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
PCDH17O14917 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
PCDH17O14917 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC20.22■□□□□ 0.83
PCDH17O14917 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
PCDH17O14917 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC20.22■□□□□ 0.83
PCDH17O14917 AL137784.2-201ENST00000607332 1000 ntBASIC20.22■□□□□ 0.83
PCDH17O14917 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC20.22■□□□□ 0.83
PCDH17O14917 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
PCDH17O14917 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
PCDH17O14917 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
PCDH17O14917 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
PCDH17O14917 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
PCDH17O14917 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC20.22■□□□□ 0.83
PCDH17O14917 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
PCDH17O14917 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
PCDH17O14917 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
PCDH17O14917 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC20.22■□□□□ 0.83
PCDH17O14917 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC20.22■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 21.5 ms