Protein–RNA interactions for Protein: O00311

CDC7, Cell division cycle 7-related protein kinase, humanhuman

Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC7O00311 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC20.89■□□□□ 0.93
CDC7O00311 AL136967.2-201ENST00000623968 743 ntBASIC20.89■□□□□ 0.93
CDC7O00311 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CDC7O00311 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
CDC7O00311 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC20.89■□□□□ 0.93
CDC7O00311 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CDC7O00311 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CDC7O00311 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC20.89■□□□□ 0.93
CDC7O00311 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CDC7O00311 FEM1AP4-201ENST00000443167 1987 ntBASIC20.88■□□□□ 0.93
CDC7O00311 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC20.88■□□□□ 0.93
CDC7O00311 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CDC7O00311 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CDC7O00311 PALM-208ENST00000592155 2272 ntTSL 4 BASIC20.88■□□□□ 0.93
CDC7O00311 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CDC7O00311 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CDC7O00311 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CDC7O00311 LHPP-203ENST00000392757 840 ntTSL 3 BASIC20.88■□□□□ 0.93
CDC7O00311 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
CDC7O00311 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC20.88■□□□□ 0.93
CDC7O00311 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
CDC7O00311 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC20.88■□□□□ 0.93
CDC7O00311 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC20.88■□□□□ 0.93
CDC7O00311 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
CDC7O00311 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
CDC7O00311 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
CDC7O00311 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC20.87■□□□□ 0.93
CDC7O00311 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC20.87■□□□□ 0.93
CDC7O00311 RASA4CP-201ENST00000424092 1398 ntBASIC20.87■□□□□ 0.93
CDC7O00311 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
CDC7O00311 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC20.87■□□□□ 0.93
CDC7O00311 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
CDC7O00311 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
CDC7O00311 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC20.87■□□□□ 0.93
CDC7O00311 AC105233.4-201ENST00000642045 216 ntBASIC20.87■□□□□ 0.93
CDC7O00311 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CDC7O00311 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
CDC7O00311 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CDC7O00311 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CDC7O00311 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC20.87■□□□□ 0.93
CDC7O00311 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC20.87■□□□□ 0.93
CDC7O00311 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC20.87■□□□□ 0.93
CDC7O00311 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CDC7O00311 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
CDC7O00311 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC20.86■□□□□ 0.93
CDC7O00311 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
CDC7O00311 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC20.86■□□□□ 0.93
CDC7O00311 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
CDC7O00311 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC20.86■□□□□ 0.93
CDC7O00311 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC20.86■□□□□ 0.93
CDC7O00311 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC20.86■□□□□ 0.93
CDC7O00311 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CDC7O00311 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CDC7O00311 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CDC7O00311 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
CDC7O00311 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CDC7O00311 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC20.86■□□□□ 0.93
CDC7O00311 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
CDC7O00311 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CDC7O00311 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CDC7O00311 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CDC7O00311 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CDC7O00311 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
CDC7O00311 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC20.85■□□□□ 0.93
CDC7O00311 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC20.85■□□□□ 0.93
CDC7O00311 DYM-203ENST00000442713 2147 ntTSL 2 BASIC20.85■□□□□ 0.93
CDC7O00311 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC20.85■□□□□ 0.93
CDC7O00311 AC091305.1-201ENST00000479476 895 ntBASIC20.85■□□□□ 0.93
CDC7O00311 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC20.85■□□□□ 0.93
CDC7O00311 SUDS3P1-201ENST00000505831 966 ntBASIC20.85■□□□□ 0.93
CDC7O00311 AL139246.5-201ENST00000606645 996 ntBASIC20.85■□□□□ 0.93
CDC7O00311 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CDC7O00311 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CDC7O00311 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CDC7O00311 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CDC7O00311 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CDC7O00311 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC20.84■□□□□ 0.93
CDC7O00311 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
CDC7O00311 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC20.84■□□□□ 0.93
CDC7O00311 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC20.84■□□□□ 0.93
CDC7O00311 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CDC7O00311 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
CDC7O00311 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC20.84■□□□□ 0.93
CDC7O00311 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC20.84■□□□□ 0.93
CDC7O00311 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC20.84■□□□□ 0.93
CDC7O00311 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC20.84■□□□□ 0.93
CDC7O00311 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CDC7O00311 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC20.84■□□□□ 0.93
CDC7O00311 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC20.84■□□□□ 0.93
CDC7O00311 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CDC7O00311 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
CDC7O00311 AL024507.2-201ENST00000606070 2574 ntBASIC20.84■□□□□ 0.93
CDC7O00311 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
CDC7O00311 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
CDC7O00311 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC20.83■□□□□ 0.93
CDC7O00311 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
CDC7O00311 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
CDC7O00311 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC20.83■□□□□ 0.92
CDC7O00311 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
CDC7O00311 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 38 ms