Protein–RNA interactions for Protein: O00300

TNFRSF11B, Tumor necrosis factor receptor superfamily member 11B, humanhuman

Predictions only

Length 401 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF11BO00300 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TNFRSF11BO00300 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
TNFRSF11BO00300 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC19.64■□□□□ 0.73
TNFRSF11BO00300 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
TNFRSF11BO00300 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC19.64■□□□□ 0.73
TNFRSF11BO00300 AC006455.2-201ENST00000429931 906 ntBASIC19.64■□□□□ 0.73
TNFRSF11BO00300 RBM38-205ENST00000440234 686 ntTSL 2 BASIC19.64■□□□□ 0.73
TNFRSF11BO00300 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC19.64■□□□□ 0.73
TNFRSF11BO00300 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
TNFRSF11BO00300 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
TNFRSF11BO00300 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC19.64■□□□□ 0.73
TNFRSF11BO00300 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
TNFRSF11BO00300 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC19.64■□□□□ 0.73
TNFRSF11BO00300 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
TNFRSF11BO00300 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
TNFRSF11BO00300 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
TNFRSF11BO00300 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
TNFRSF11BO00300 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
TNFRSF11BO00300 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC19.64■□□□□ 0.73
TNFRSF11BO00300 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
TNFRSF11BO00300 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
TNFRSF11BO00300 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
TNFRSF11BO00300 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
TNFRSF11BO00300 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC19.63■□□□□ 0.73
TNFRSF11BO00300 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC19.63■□□□□ 0.73
TNFRSF11BO00300 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC19.63■□□□□ 0.73
TNFRSF11BO00300 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC19.63■□□□□ 0.73
TNFRSF11BO00300 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
TNFRSF11BO00300 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
TNFRSF11BO00300 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
TNFRSF11BO00300 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
TNFRSF11BO00300 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
TNFRSF11BO00300 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
TNFRSF11BO00300 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
TNFRSF11BO00300 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
TNFRSF11BO00300 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
TNFRSF11BO00300 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC19.62■□□□□ 0.73
TNFRSF11BO00300 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
TNFRSF11BO00300 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC19.62■□□□□ 0.73
TNFRSF11BO00300 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC19.62■□□□□ 0.73
TNFRSF11BO00300 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
TNFRSF11BO00300 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC19.62■□□□□ 0.73
TNFRSF11BO00300 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
TNFRSF11BO00300 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC19.62■□□□□ 0.73
TNFRSF11BO00300 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
TNFRSF11BO00300 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC19.62■□□□□ 0.73
TNFRSF11BO00300 MIR6724-1-201ENST00000616420 92 ntBASIC19.62■□□□□ 0.73
TNFRSF11BO00300 MIR6724-2-201ENST00000616483 92 ntBASIC19.62■□□□□ 0.73
TNFRSF11BO00300 MIR6724-4-201ENST00000617390 92 ntBASIC19.62■□□□□ 0.73
TNFRSF11BO00300 MIR6724-3-201ENST00000622482 92 ntBASIC19.62■□□□□ 0.73
TNFRSF11BO00300 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
TNFRSF11BO00300 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
TNFRSF11BO00300 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
TNFRSF11BO00300 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC19.61■□□□□ 0.73
TNFRSF11BO00300 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC19.61■□□□□ 0.73
TNFRSF11BO00300 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC19.61■□□□□ 0.73
TNFRSF11BO00300 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
TNFRSF11BO00300 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
TNFRSF11BO00300 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC19.61■□□□□ 0.73
TNFRSF11BO00300 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
TNFRSF11BO00300 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC19.61■□□□□ 0.73
TNFRSF11BO00300 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
TNFRSF11BO00300 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
TNFRSF11BO00300 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
TNFRSF11BO00300 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
TNFRSF11BO00300 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
TNFRSF11BO00300 AC087239.1-201ENST00000622671 572 ntBASIC19.61■□□□□ 0.73
TNFRSF11BO00300 LINC01006-201ENST00000333319 2292 ntBASIC19.61■□□□□ 0.73
TNFRSF11BO00300 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC19.61■□□□□ 0.73
TNFRSF11BO00300 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC19.61■□□□□ 0.73
TNFRSF11BO00300 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
TNFRSF11BO00300 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
TNFRSF11BO00300 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
TNFRSF11BO00300 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
TNFRSF11BO00300 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
TNFRSF11BO00300 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
TNFRSF11BO00300 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
TNFRSF11BO00300 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
TNFRSF11BO00300 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
TNFRSF11BO00300 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC19.61■□□□□ 0.73
TNFRSF11BO00300 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
TNFRSF11BO00300 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
TNFRSF11BO00300 AL049796.1-201ENST00000565336 1766 ntBASIC19.6■□□□□ 0.73
TNFRSF11BO00300 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
TNFRSF11BO00300 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
TNFRSF11BO00300 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
TNFRSF11BO00300 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC19.6■□□□□ 0.73
TNFRSF11BO00300 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC19.6■□□□□ 0.73
TNFRSF11BO00300 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
TNFRSF11BO00300 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
TNFRSF11BO00300 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC19.6■□□□□ 0.73
TNFRSF11BO00300 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC19.6■□□□□ 0.73
TNFRSF11BO00300 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
TNFRSF11BO00300 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
TNFRSF11BO00300 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
TNFRSF11BO00300 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
TNFRSF11BO00300 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
TNFRSF11BO00300 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
TNFRSF11BO00300 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC19.59■□□□□ 0.73
TNFRSF11BO00300 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC19.59■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms