Protein–RNA interactions for Protein: O00268

TAF4, Transcription initiation factor TFIID subunit 4, humanhuman

Predictions only

Length 1,085 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TAF4O00268 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC20.73■□□□□ 0.91
TAF4O00268 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC20.73■□□□□ 0.91
TAF4O00268 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
TAF4O00268 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC20.73■□□□□ 0.91
TAF4O00268 ALDH1A3-203ENST00000557963 1670 ntBASIC20.73■□□□□ 0.91
TAF4O00268 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
TAF4O00268 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC20.73■□□□□ 0.91
TAF4O00268 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC20.72■□□□□ 0.91
TAF4O00268 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
TAF4O00268 AC127496.7-201ENST00000625110 1798 ntBASIC20.72■□□□□ 0.91
TAF4O00268 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
TAF4O00268 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
TAF4O00268 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC20.72■□□□□ 0.91
TAF4O00268 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC20.72■□□□□ 0.91
TAF4O00268 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC20.72■□□□□ 0.91
TAF4O00268 AC079140.4-201ENST00000507448 529 ntBASIC20.72■□□□□ 0.91
TAF4O00268 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC20.72■□□□□ 0.91
TAF4O00268 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC20.72■□□□□ 0.91
TAF4O00268 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
TAF4O00268 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC20.72■□□□□ 0.91
TAF4O00268 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
TAF4O00268 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
TAF4O00268 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC20.72■□□□□ 0.91
TAF4O00268 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC20.72■□□□□ 0.91
TAF4O00268 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
TAF4O00268 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
TAF4O00268 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC20.72■□□□□ 0.91
TAF4O00268 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
TAF4O00268 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
TAF4O00268 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC20.71■□□□□ 0.91
TAF4O00268 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC20.71■□□□□ 0.91
TAF4O00268 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC20.71■□□□□ 0.91
TAF4O00268 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC20.71■□□□□ 0.91
TAF4O00268 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC20.71■□□□□ 0.91
TAF4O00268 AC133552.2-202ENST00000575694 574 ntBASIC20.71■□□□□ 0.91
TAF4O00268 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
TAF4O00268 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
TAF4O00268 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
TAF4O00268 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
TAF4O00268 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
TAF4O00268 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
TAF4O00268 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
TAF4O00268 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
TAF4O00268 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC20.7■□□□□ 0.9
TAF4O00268 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
TAF4O00268 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
TAF4O00268 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC20.7■□□□□ 0.9
TAF4O00268 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
TAF4O00268 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC20.7■□□□□ 0.9
TAF4O00268 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
TAF4O00268 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC20.7■□□□□ 0.9
TAF4O00268 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC20.7■□□□□ 0.9
TAF4O00268 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
TAF4O00268 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
TAF4O00268 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC20.69■□□□□ 0.9
TAF4O00268 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC20.69■□□□□ 0.9
TAF4O00268 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
TAF4O00268 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
TAF4O00268 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
TAF4O00268 PARP1-202ENST00000366792 553 ntTSL 3 BASIC20.69■□□□□ 0.9
TAF4O00268 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
TAF4O00268 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC20.69■□□□□ 0.9
TAF4O00268 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC20.69■□□□□ 0.9
TAF4O00268 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
TAF4O00268 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC20.69■□□□□ 0.9
TAF4O00268 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
TAF4O00268 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
TAF4O00268 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC20.69■□□□□ 0.9
TAF4O00268 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC20.69■□□□□ 0.9
TAF4O00268 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC20.69■□□□□ 0.9
TAF4O00268 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
TAF4O00268 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC20.69■□□□□ 0.9
TAF4O00268 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
TAF4O00268 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
TAF4O00268 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
TAF4O00268 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
TAF4O00268 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC20.68■□□□□ 0.9
TAF4O00268 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC20.68■□□□□ 0.9
TAF4O00268 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
TAF4O00268 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC20.68■□□□□ 0.9
TAF4O00268 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC20.68■□□□□ 0.9
TAF4O00268 UBE2DNL-204ENST00000602536 740 ntBASIC20.68■□□□□ 0.9
TAF4O00268 AC104187.1-201ENST00000607510 612 ntBASIC20.68■□□□□ 0.9
TAF4O00268 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC20.68■□□□□ 0.9
TAF4O00268 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
TAF4O00268 LINC00526-201ENST00000581067 1875 ntBASIC20.68■□□□□ 0.9
TAF4O00268 FP325331.1-202ENST00000623531 1380 ntBASIC20.68■□□□□ 0.9
TAF4O00268 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
TAF4O00268 AL161729.1-201ENST00000604104 1402 ntBASIC20.68■□□□□ 0.9
TAF4O00268 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC20.67■□□□□ 0.9
TAF4O00268 LSR-205ENST00000427250 1606 ntTSL 2 BASIC20.67■□□□□ 0.9
TAF4O00268 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
TAF4O00268 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
TAF4O00268 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC20.67■□□□□ 0.9
TAF4O00268 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
TAF4O00268 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
TAF4O00268 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC20.67■□□□□ 0.9
TAF4O00268 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC20.67■□□□□ 0.9
TAF4O00268 CNN2P6-201ENST00000439038 900 ntBASIC20.67■□□□□ 0.9
TAF4O00268 AL158047.1-201ENST00000445918 881 ntBASIC20.67■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms