Protein–RNA interactions for Protein: H3BSU7

TMX2-CTNND1, TMX2-CTNND1 readthrough (NMD candidate), humanhuman

Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMX2-CTNND1H3BSU7 AC011767.1-201ENST00000617410 1153 ntBASIC20.85■□□□□ 0.93
TMX2-CTNND1H3BSU7 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
TMX2-CTNND1H3BSU7 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC20.85■□□□□ 0.93
TMX2-CTNND1H3BSU7 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
TMX2-CTNND1H3BSU7 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
TMX2-CTNND1H3BSU7 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
TMX2-CTNND1H3BSU7 DUSP8P3-201ENST00000399571 1760 ntBASIC20.85■□□□□ 0.93
TMX2-CTNND1H3BSU7 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC20.85■□□□□ 0.93
TMX2-CTNND1H3BSU7 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
TMX2-CTNND1H3BSU7 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC20.84■□□□□ 0.93
TMX2-CTNND1H3BSU7 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
TMX2-CTNND1H3BSU7 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
TMX2-CTNND1H3BSU7 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
TMX2-CTNND1H3BSU7 ESRRAP2-201ENST00000418437 1549 ntBASIC20.84■□□□□ 0.93
TMX2-CTNND1H3BSU7 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
TMX2-CTNND1H3BSU7 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
TMX2-CTNND1H3BSU7 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
TMX2-CTNND1H3BSU7 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC20.84■□□□□ 0.93
TMX2-CTNND1H3BSU7 EMC9-206ENST00000560403 872 ntTSL 2 BASIC20.84■□□□□ 0.93
TMX2-CTNND1H3BSU7 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
TMX2-CTNND1H3BSU7 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
TMX2-CTNND1H3BSU7 ECEL1P1-201ENST00000373592 1742 ntBASIC20.84■□□□□ 0.93
TMX2-CTNND1H3BSU7 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC20.84■□□□□ 0.93
TMX2-CTNND1H3BSU7 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
TMX2-CTNND1H3BSU7 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.93
TMX2-CTNND1H3BSU7 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
TMX2-CTNND1H3BSU7 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
TMX2-CTNND1H3BSU7 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC20.83■□□□□ 0.93
TMX2-CTNND1H3BSU7 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
TMX2-CTNND1H3BSU7 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC20.83■□□□□ 0.93
TMX2-CTNND1H3BSU7 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
TMX2-CTNND1H3BSU7 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC20.83■□□□□ 0.92
TMX2-CTNND1H3BSU7 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.92
TMX2-CTNND1H3BSU7 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
TMX2-CTNND1H3BSU7 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
TMX2-CTNND1H3BSU7 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC20.82■□□□□ 0.92
TMX2-CTNND1H3BSU7 MYB-221ENST00000527615 2381 ntTSL 5 BASIC20.82■□□□□ 0.92
TMX2-CTNND1H3BSU7 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
TMX2-CTNND1H3BSU7 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
TMX2-CTNND1H3BSU7 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC20.82■□□□□ 0.92
TMX2-CTNND1H3BSU7 AC104771.1-201ENST00000603335 964 ntBASIC20.82■□□□□ 0.92
TMX2-CTNND1H3BSU7 AL109923.1-201ENST00000618799 583 ntBASIC20.82■□□□□ 0.92
TMX2-CTNND1H3BSU7 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC20.82■□□□□ 0.92
TMX2-CTNND1H3BSU7 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
TMX2-CTNND1H3BSU7 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
TMX2-CTNND1H3BSU7 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
TMX2-CTNND1H3BSU7 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
TMX2-CTNND1H3BSU7 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
TMX2-CTNND1H3BSU7 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
TMX2-CTNND1H3BSU7 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
TMX2-CTNND1H3BSU7 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
TMX2-CTNND1H3BSU7 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
TMX2-CTNND1H3BSU7 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
TMX2-CTNND1H3BSU7 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
TMX2-CTNND1H3BSU7 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC20.81■□□□□ 0.92
TMX2-CTNND1H3BSU7 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
TMX2-CTNND1H3BSU7 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
TMX2-CTNND1H3BSU7 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
TMX2-CTNND1H3BSU7 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
TMX2-CTNND1H3BSU7 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
TMX2-CTNND1H3BSU7 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
TMX2-CTNND1H3BSU7 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
TMX2-CTNND1H3BSU7 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
TMX2-CTNND1H3BSU7 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
TMX2-CTNND1H3BSU7 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC20.8■□□□□ 0.92
TMX2-CTNND1H3BSU7 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC20.8■□□□□ 0.92
TMX2-CTNND1H3BSU7 NCF1B-203ENST00000435988 1254 ntBASIC20.8■□□□□ 0.92
TMX2-CTNND1H3BSU7 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
TMX2-CTNND1H3BSU7 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC20.8■□□□□ 0.92
TMX2-CTNND1H3BSU7 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC20.8■□□□□ 0.92
TMX2-CTNND1H3BSU7 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
TMX2-CTNND1H3BSU7 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
TMX2-CTNND1H3BSU7 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
TMX2-CTNND1H3BSU7 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
TMX2-CTNND1H3BSU7 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC20.8■□□□□ 0.92
TMX2-CTNND1H3BSU7 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC20.8■□□□□ 0.92
TMX2-CTNND1H3BSU7 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC20.8■□□□□ 0.92
TMX2-CTNND1H3BSU7 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
TMX2-CTNND1H3BSU7 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC20.8■□□□□ 0.92
TMX2-CTNND1H3BSU7 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
TMX2-CTNND1H3BSU7 ASL-203ENST00000380839 1765 ntTSL 5 BASIC20.8■□□□□ 0.92
TMX2-CTNND1H3BSU7 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
TMX2-CTNND1H3BSU7 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
TMX2-CTNND1H3BSU7 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
TMX2-CTNND1H3BSU7 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
TMX2-CTNND1H3BSU7 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
TMX2-CTNND1H3BSU7 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
TMX2-CTNND1H3BSU7 CROCCP5-201ENST00000436658 830 ntBASIC20.79■□□□□ 0.92
TMX2-CTNND1H3BSU7 MAP2K4P1-201ENST00000438453 1195 ntBASIC20.79■□□□□ 0.92
TMX2-CTNND1H3BSU7 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
TMX2-CTNND1H3BSU7 KRT87P-202ENST00000534226 1464 ntBASIC20.79■□□□□ 0.92
TMX2-CTNND1H3BSU7 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
TMX2-CTNND1H3BSU7 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC20.78■□□□□ 0.92
TMX2-CTNND1H3BSU7 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC20.78■□□□□ 0.92
TMX2-CTNND1H3BSU7 AC005224.4-201ENST00000583262 1652 ntBASIC20.78■□□□□ 0.92
TMX2-CTNND1H3BSU7 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC20.78■□□□□ 0.92
TMX2-CTNND1H3BSU7 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
TMX2-CTNND1H3BSU7 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC20.78■□□□□ 0.92
TMX2-CTNND1H3BSU7 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC20.78■□□□□ 0.92
TMX2-CTNND1H3BSU7 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 17.2 ms