Protein–RNA interactions for Protein: A7MD48

SRRM4, Serine/arginine repetitive matrix protein 4, humanhuman

Known RBP Predictions only

Length 611 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM4A7MD48 AC099791.1-201ENST00000416440 715 ntBASIC17.13■□□□□ 0.33
SRRM4A7MD48 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC17.13■□□□□ 0.33
SRRM4A7MD48 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
SRRM4A7MD48 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
SRRM4A7MD48 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC17.13■□□□□ 0.33
SRRM4A7MD48 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC17.13■□□□□ 0.33
SRRM4A7MD48 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
SRRM4A7MD48 GRAMD4P4-201ENST00000613563 1115 ntBASIC17.13■□□□□ 0.33
SRRM4A7MD48 AC110285.6-201ENST00000617652 491 ntBASIC17.13■□□□□ 0.33
SRRM4A7MD48 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SRRM4A7MD48 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
SRRM4A7MD48 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
SRRM4A7MD48 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC17.13■□□□□ 0.33
SRRM4A7MD48 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC17.13■□□□□ 0.33
SRRM4A7MD48 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC17.13■□□□□ 0.33
SRRM4A7MD48 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
SRRM4A7MD48 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC17.13■□□□□ 0.33
SRRM4A7MD48 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SRRM4A7MD48 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC17.13■□□□□ 0.33
SRRM4A7MD48 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SRRM4A7MD48 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SRRM4A7MD48 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC17.13■□□□□ 0.33
SRRM4A7MD48 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC17.12■□□□□ 0.33
SRRM4A7MD48 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
SRRM4A7MD48 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
SRRM4A7MD48 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
SRRM4A7MD48 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
SRRM4A7MD48 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SRRM4A7MD48 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
SRRM4A7MD48 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SRRM4A7MD48 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SRRM4A7MD48 MAG-206ENST00000597035 542 ntTSL 4 BASIC17.12■□□□□ 0.33
SRRM4A7MD48 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SRRM4A7MD48 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
SRRM4A7MD48 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
SRRM4A7MD48 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SRRM4A7MD48 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SRRM4A7MD48 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC17.12■□□□□ 0.33
SRRM4A7MD48 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SRRM4A7MD48 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SRRM4A7MD48 AP006587.3-201ENST00000525742 1516 ntBASIC17.11■□□□□ 0.33
SRRM4A7MD48 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SRRM4A7MD48 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC17.11■□□□□ 0.33
SRRM4A7MD48 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SRRM4A7MD48 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SRRM4A7MD48 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SRRM4A7MD48 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SRRM4A7MD48 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC17.11■□□□□ 0.33
SRRM4A7MD48 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC17.11■□□□□ 0.33
SRRM4A7MD48 MPST-208ENST00000628507 698 ntTSL 5 BASIC17.11■□□□□ 0.33
SRRM4A7MD48 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SRRM4A7MD48 DYM-203ENST00000442713 2147 ntTSL 2 BASIC17.11■□□□□ 0.33
SRRM4A7MD48 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SRRM4A7MD48 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
SRRM4A7MD48 PXK-203ENST00000383715 1756 ntTSL 5 BASIC17.1■□□□□ 0.33
SRRM4A7MD48 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SRRM4A7MD48 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC17.1■□□□□ 0.33
SRRM4A7MD48 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SRRM4A7MD48 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
SRRM4A7MD48 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
SRRM4A7MD48 EDA-201ENST00000338901 1233 ntBASIC17.1■□□□□ 0.33
SRRM4A7MD48 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC17.1■□□□□ 0.33
SRRM4A7MD48 GRAMD4P2-201ENST00000423297 1097 ntBASIC17.1■□□□□ 0.33
SRRM4A7MD48 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SRRM4A7MD48 AP001330.3-201ENST00000520123 633 ntBASIC17.1■□□□□ 0.33
SRRM4A7MD48 AICDA-202ENST00000537228 667 ntTSL 5 BASIC17.1■□□□□ 0.33
SRRM4A7MD48 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC17.1■□□□□ 0.33
SRRM4A7MD48 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC17.1■□□□□ 0.33
SRRM4A7MD48 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
SRRM4A7MD48 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SRRM4A7MD48 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SRRM4A7MD48 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SRRM4A7MD48 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC17.09■□□□□ 0.33
SRRM4A7MD48 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
SRRM4A7MD48 AL024507.2-201ENST00000606070 2574 ntBASIC17.09■□□□□ 0.33
SRRM4A7MD48 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SRRM4A7MD48 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC17.09■□□□□ 0.33
SRRM4A7MD48 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC17.09■□□□□ 0.33
SRRM4A7MD48 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC17.09■□□□□ 0.33
SRRM4A7MD48 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC17.09■□□□□ 0.33
SRRM4A7MD48 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
SRRM4A7MD48 AC027682.1-201ENST00000562846 899 ntBASIC17.09■□□□□ 0.33
SRRM4A7MD48 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
SRRM4A7MD48 TSPY26P-201ENST00000476365 1326 ntBASIC17.09■□□□□ 0.33
SRRM4A7MD48 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC17.09■□□□□ 0.33
SRRM4A7MD48 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SRRM4A7MD48 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
SRRM4A7MD48 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC17.09■□□□□ 0.33
SRRM4A7MD48 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SRRM4A7MD48 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
SRRM4A7MD48 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC17.09■□□□□ 0.33
SRRM4A7MD48 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SRRM4A7MD48 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
SRRM4A7MD48 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
SRRM4A7MD48 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SRRM4A7MD48 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC17.08■□□□□ 0.32
SRRM4A7MD48 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
SRRM4A7MD48 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
SRRM4A7MD48 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC17.08■□□□□ 0.32
SRRM4A7MD48 AL031432.3-201ENST00000607698 485 ntBASIC17.08■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 100.1 ms